Acidovorax sp. KKS102: C380_14300
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Entry
C380_14300 CDS
T02290
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ack03009
]
C380_14300 (rumA)
Enzymes [BR:
ack01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C380_14300 (rumA)
Ribosome biogenesis [BR:
ack03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C380_14300 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
TPMT
Methyltransf_23
MTS
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AFU46559
UniProt:
K0I5S9
LinkDB
All DBs
Position
complement(3128640..3130103)
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AA seq
487 aa
AA seq
DB search
MSAPKELSPSFEPTEQNAQDNLPEGWLHVQSMDLDAQGVARKPDGKVVFIDGALPFELVT
ANTHRKKNNWEQASLVAIHRESSQRVRPDCPHFGLHAGACGGCKMQHLHVGAQVAVKQRV
LEDNLWHLGKVKAETMLRPIEGPAWGYRYRARLAVRHVIKKGQVLVGFHERKSRYIADMQ
TCKILPPHVDAMLMPLRALIASLDARDTCPQIELACGDTVTALVLRHLEPLSAEDIARLR
AFAAEHHVQWWLQPKGPDTVKLLDEGGEQLSYALPDFGITMPFKPTDFTQVNPHINRVLV
SRALRLLDVQPHERVIDWFCGLGNFTLPLATQAREVLGIEGSEALVARSRENYALNQAQA
PDHKALAATDFVARNLFEMTPEMLVADGAADKWLVDPPREGAFALAKALADIEQARIGAE
GAGPLPAGAEGWTPPKRIVYVSCNPATLARDAGLLVHLAGYRCTAAGMVNMFPHTAHVES
MAVFERV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccgaaagaactatccccctcgtttgaacccaccgagcagaacgctcaagac
aacctgcctgaaggctggctgcatgtgcagtccatggacctcgacgcccagggcgtggcc
cgcaagcctgacggcaaggtggtcttcatcgatggcgccctgccattcgagctggtcacc
gccaacacccaccgcaaaaagaacaactgggagcaggccagcctggtggcgatccaccgc
gaatcgtcccagcgcgtgcggccggattgcccgcactttggcctgcacgcaggcgcctgc
ggcggctgcaagatgcagcatctgcacgtcggtgcccaagtggccgtcaagcagcgggtg
ctggaggacaacctctggcacctgggcaaggtgaaggccgagaccatgctgcgtcccatt
gaagggcccgcctggggctaccgctaccgtgcccgcctggccgtgcgccacgtgatcaag
aaggggcaggtgctggtgggctttcatgagcgcaagagccggtacatcgccgacatgcag
acctgcaagatcctgccgccgcatgtcgatgccatgctgatgcccctgcgcgccctgatt
gccagcctggacgcccgcgacacctgcccgcagatcgaactggcctgtggtgacaccgtg
accgcgctggtattgcgccacctggagccgctctccgccgaggacatcgcccggctgcgc
gcctttgccgcagagcaccacgtgcaatggtggctgcagcccaagggcccggacaccgtg
aagctgctggacgagggtggtgagcagctgtcgtacgcactgccggactttggcatcacc
atgcctttcaagcccaccgacttcacccaggtgaacccgcacatcaaccgggtgctggtg
agccgcgcgctgcgcctgctggacgtgcagccgcacgagcgcgtgatcgactggttctgc
ggcctgggcaacttcacgctgccgctggccacgcaggcgcgcgaggtgctgggcattgaa
ggcagtgaggccctggtggcccgctcgcgtgagaactatgcattgaatcaggcccaggcg
ccggaccataaagcgctggcagctacggattttgtagcgcgtaacctgttcgagatgaca
ccggagatgctggtggccgacggcgctgccgacaaatggctggtggacccaccccgcgaa
ggggcgtttgctctggccaaggcgttggcggacatcgagcaggcccgcattggcgccgag
ggcgctggcccgttgcccgcaggggccgaaggctggacgcctccgaagcgcattgtgtac
gtgagctgcaacccggccaccctggcgcgcgacgcggggctgctggtacatttggccggc
taccggtgcacggcggcgggcatggtgaacatgtttccgcacacggcccatgtggaaagc
atggcggtgttcgagcgggtctga
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