Acidovorax sp. KKS102: C380_14735
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Entry
C380_14735 CDS
T02290
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ack03021
]
C380_14735
03009 Ribosome biogenesis [BR:
ack03009
]
C380_14735
Transcription machinery [BR:
ack03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C380_14735
Ribosome biogenesis [BR:
ack03009
]
Prokaryotic type
rRNA transcription factors
C380_14735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_KhpA-B
KH_1
Motif
Other DBs
NCBI-ProteinID:
AFU46646
UniProt:
K0IBH6
LinkDB
All DBs
Position
complement(3227379..3228863)
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AA seq
494 aa
AA seq
DB search
MNRELLMLVEAISREKNVERDVVLGAVESALAQATKKLYQGEVDIRVSIDRDSGNYETFR
RWLVVPDDAGLQNPEAEELLMDAKERIPDIEVGEYIEEGVESVPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGEKIFTGTVKRMDKGDIIVESGRVEGRLRRSEMIPKENLRSGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRNEVPEIEQGLLEIKSCARDPGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASDLTGWKINIMDAAESAQKQANETDTARKL
FMEKLDVDEEIADILISEGFNSLEEVAYVPLQEMLEIESFDEDTVNELRARAKDALLTME
IAREESVEEVSQDLRDLEGLTPELIAKLAEGGVHTRDDLADLAIDELTDLTGQSAEEAKA
LIMKAREHWFAGQE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaattgttgatgttggttgaggccatttcgcgcgagaagaacgtggagcgt
gatgtggtcttgggcgccgtggagtcggccctggcccaggctaccaagaagctgtaccag
ggcgaggtggacattcgcgtgtcgattgatcgcgacagcggcaattacgagactttccgc
cgctggctggtggtgcccgacgacgccggtctgcagaaccccgaagccgaagagctgctg
atggatgccaaagagcgcatcccggacatcgaggtgggtgaatacatcgaagagggcgtc
gagtccgtgcccatcggccgcatcggtgccatggctgccaagcaggtcatcctgcagaag
atccgcgacgcagagcgcgagatgctgctgaacgacttcatgtcgcgcggcgaaaagatc
ttcaccggcaccgtcaagcgcatggacaagggcgacatcattgtcgaatccggccgcgtg
gaaggtcgcctgcgccgcagcgaaatgatccccaaggaaaacctgcgcagcggcgaccgc
gtacgggccatgatcatggaagtggatctgaccctgcgtggcgcgcccatcatcctgtcg
cgctcggcacccgagttcatgatcgaactcttccgcaatgaagtgcccgagatcgagcaa
ggcctgctggagatcaagtcctgcgcccgtgaccccggctcgcgtgccaagatcgccgtg
ctgagccacgacaagcgtgtggaccccatcggcacctgcgtcggcgtgcgcggcacccgc
gtgaatgcggtgaccaacgaactcgctggcgagcgcgtggacatcgtgctgtggtctgaa
gacccggcacagtttgtgattggcgcactggccccggccaatgtgtcctccatcgtggtc
gatgaagaaaagcatgccatggacgtggtcgtggacgaggaaaacctcgccatcgccatc
ggccgtggtggtcagaacgtgcgcctggcgtccgacctgaccggctggaagatcaacatc
atggacgccgccgaaagcgcgcaaaagcaggccaacgagaccgacacggcccgcaagctg
ttcatggaaaagctggatgtggacgaggaaatcgccgacatcctgatctccgaaggcttc
aacagcctggaagaagtggcctatgtgccgctgcaggaaatgctggagatcgaaagcttc
gacgaagacaccgtgaacgagttgcgcgcccgcgccaaggatgcgctgctcaccatggaa
atcgcccgtgaggaaagcgtggaagaggtctcccaggacctgcgcgatctcgaaggcctc
acccccgagctcattgccaagttggctgagggtggtgtgcacacacgtgacgacctggcc
gacctggccattgatgaactgaccgacctgaccggacagtctgcagaagaagccaaagcc
ttgatcatgaaggcgcgcgaacactggttcgcggggcaagagtaa
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