Acidovorax sp. KKS102: C380_19935
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Entry
C380_19935 CDS
T02290
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ack03016
]
C380_19935
Enzymes [BR:
ack01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C380_19935
Transfer RNA biogenesis [BR:
ack03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C380_19935
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
ProQ_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AFU47681
UniProt:
K0IE79
LinkDB
All DBs
Position
4339061..4341136
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AA seq
691 aa
AA seq
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MHALFEEAGKFLAGRILSEADTSAQVELDSGKRVKVKAAHILLKFEKPAPAELVAQAQAV
AETIELDLAWEFAPEDEFGFADLARDYFSENATLAQQAGALFRLYDAPHYFRRAGKGRFK
KASAEILQQALAAIEKKKAILAQIDEWAAQLGRGECPQPIRDQLYKILFKPDKNAPEYKA
VVEASRTTHTAPLDLLQKAGAIDSSYQFHWKRFLFENFPKGTGFPAVTAPVIADELPLSP
AQAYSIDDSQTTEIDDALSVQGLGTGTVVLGIHIAAPGLAIQPGSAIDQLGRARLSTVYM
PGYKITMLPDDVVQTYTLDEGRANPAVSLYVTIDEATLEFKGSETKLERVHVAANLRHDQ
LDSVVTEEWLTNPAFEHRNDPKRLSELRPQLSFLHRLAKDLKARREVVRGKPENFNRPDY
NFRLVGNNGAEPTGDEQVQISVRQRGAPLDLIVAEAMIVANSTWGSWMAELGVPGIYRSQ
ASMAPGVKVRMGTKALPHAGIGVKAYSWATSPLRRYTDLVNQWQIIACARHGKTAALAAP
FKPKDADLFSIISSFDAAYSAYNGYQAGMERFWTLKYVEQNGITELNATVFKEGPGGSFL
VRADDIPLVFPVLGAQNLPRGARLKVKLGEVDEITLDIHGTVIERLDDPADTSDDGPVDD
AEDDDTVAGPIAIAVDVNEAPADAAAAAPAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagaagccggcaaatttctcgccggccgtatcctgtccgaagcc
gatacctctgcccaagtggagctggactcgggcaaacgggtcaaggtcaaggccgcccac
atcctcctgaagttcgaaaaacccgccccggcagaactcgtcgcccaggcccaggccgtg
gccgagaccatcgagctggacctggcctgggagttcgcgcccgaagacgaatttggcttt
gccgacctggcgcgggactatttctccgagaacgccaccctggcccagcaggccggtgcg
ctgttccgtctgtacgacgcaccgcactacttccgccgcgcaggcaagggccgcttcaag
aaggcatcggccgagatcctgcagcaggccctggccgccatcgagaagaagaaggccatc
ctcgcgcagatcgacgagtgggcagcgcaactgggccggggcgaatgcccgcagcccatc
cgcgaccagctctacaagattctgttcaagcccgataagaacgcgcccgagtacaaggcc
gtggtcgaggccagccgcaccacgcacaccgcgccgctcgacctgctgcaaaaggcgggc
gccatcgattccagctaccagttccactggaagcggttcttgttcgagaatttccccaag
ggcacgggctttccggccgttaccgcccccgtcattgccgacgagctgccgctgtcgccc
gcgcaggcctactcgatcgacgactcgcagaccaccgaaatcgacgacgcgttgtccgtc
caggggctgggcacgggcaccgtggtgctgggcatccacatcgccgcgcccggcctggcc
atccagcccggcagcgctatcgaccagctcggccgtgcccgcctgtccaccgtgtacatg
ccgggctacaagatcaccatgctgcccgacgacgtggtgcaaacctacacgctggacgaa
ggccgcgccaacccagccgtgtcgctgtacgtgaccatcgacgaagccacgctggagttc
aaaggctccgagaccaagctggagcgcgtgcacgtggccgccaacctgcgccacgaccag
ctcgacagcgtggtgacggaagaatggctcaccaacccggcgtttgagcaccgaaacgac
cccaagcgcttgtccgaattgcgcccgcagctatcatttttgcaccgcctcgccaaggac
ctcaaggcccgccgcgaagtcgtgcgcggcaagcctgagaacttcaaccggccggactac
aacttccgcctggtcggcaacaacggcgccgagcccaccggcgacgagcaggtgcagatc
agcgtgcgccagcgcggcgcaccgctcgatttgatcgtggccgaggccatgatcgtggcc
aacagcacctggggtagctggatggccgagctgggcgtgcccggcatctaccgcagccag
gccagcatggcgccgggcgtgaaggtgcgcatgggcaccaaggcgctgccgcatgcgggc
atcggcgtgaaggcgtattcgtgggccacatcccccctgcgccgctacaccgacctggtc
aaccagtggcagatcattgcctgcgcgcgccacggcaagacggccgcgctggccgcgccc
ttcaagcccaaggacgccgacctgttctccatcatcagcagctttgacgcggcctacagc
gcctacaacggctaccaggcgggcatggaacgcttctggacgctgaaatatgtggagcag
aacggcatcaccgagctgaacgctactgtcttcaaggaaggcccgggcggtagctttttg
gtgcgggctgacgacattccgctggtcttccccgtgctgggcgcgcagaacctgccgcgc
ggcgcgcgcctcaaggtcaagctgggcgaggtggacgagatcacgctcgacatccacggc
accgtgatcgagcgcctggacgaccccgcagacaccagcgacgatggccccgtggacgat
gccgaggacgacgacaccgtggccggcccgattgcgattgcggtggatgtgaacgaggcc
cctgccgatgccgctgcggcagcaccggccgcttga
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