Acidovorax sp. KKS102: C380_21430
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Entry
C380_21430 CDS
T02290
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ack
Acidovorax sp. KKS102
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ack03009
]
C380_21430
Enzymes [BR:
ack01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C380_21430
Ribosome biogenesis [BR:
ack03009
]
Prokaryotic type
rRNA helicases
C380_21430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
WSD
Motif
Other DBs
NCBI-ProteinID:
AFU47978
UniProt:
K0HY42
LinkDB
All DBs
Position
complement(4662583..4664028)
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AA seq
481 aa
AA seq
DB search
MEGGPDNRPMTSKENQARTDFSALALSPAMLANLQQLGYTTMTPIQAASLPPALLGKDLI
AQASTGSGKTAAFALALLANLNPRRFAVQALVLCPTRELADQVTTEIRRLARAEENIKVV
TLCGGVPLRGQMLSLEHGAHIVVGTPGRVMDHLERQHLTLEALNTLVLDEADRMLDMGFF
DDIVTVARQCPKERQTLLFSATYPEGIAKLSAQFMKQPEQITVQAQHAEGKIEQRWYEVK
NSERLHVVSQLLNHFRPDSSIAFCNTKQQCRDLVAVLQAQGFSALALFGELEQRERDQVL
VQFANKSCSVLVATDVAARGLDIANLAAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNL
ASLDEMGSVGKIEQLQGRESRWFPLADLTPTGSGPLVPPMVTLQIIGGRKEKIRAGDVLG
ALTGDMGYTREQVGKINVNDFSTYVAVDRAIGAQAAQRLNQGRVKGKTVKARLVSGNQKF
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgggccggataatcggcccatgacctccaaagaaaatcaagcccgcactgat
ttcagcgcgctggccctaagccccgccatgctggccaacctgcagcaactgggctacacc
acgatgacccccatccaggcggccagcctgccgcccgccctgctgggcaaggacctgatc
gcccaggccagcaccggcagcggcaagacggccgcgtttgccctggccctgctggccaac
ctcaacccccgccgctttgccgtgcaggccctggtgctgtgccccacgcgcgagctggcc
gaccaggtgaccaccgagatccgccgcctggcgcgcgccgaagaaaacatcaaggtcgtg
accctgtgcggcggcgtgccgctgcgcggccagatgctgagcctggagcatggcgcccac
atcgtggtgggcacgcctggccgcgtgatggaccacctggagcgccagcacctgacgctg
gaagcgctcaacaccctggtgctggacgaagccgaccgcatgctcgacatgggcttcttc
gacgacatcgtcaccgtggcgcgccagtgccccaaagagcgccagaccctgctgttctcg
gccacttaccccgagggcatcgccaagctcagtgcgcagttcatgaagcagcccgagcag
atcacggtgcaggcgcagcatgccgaaggcaagatcgagcagcgctggtacgaggtgaaa
aacagcgagcgcctgcatgtggtgtcgcagttgctcaaccattttcggcccgattcgtcg
attgcgttctgcaacaccaagcagcaatgccgcgacctcgtggctgtgctgcaggcccag
ggcttcagcgcgctggcgctgtttggcgagctggagcagcgtgagcgcgaccaggtgctg
gtgcagtttgccaacaagagctgctcggtactggtggccaccgacgtggccgcgcggggc
ctggacattgccaacctggccgccgtgatcaacgtggacgtgacgcccgaccccgaggtg
cacatccaccgcatcggccgcacgggccggggcgatgccgagggcctggcgctgaacctg
gcgagcctggacgagatgggcagcgtgggcaaaatcgagcaactgcagggccgcgagtcg
cgctggttcccgctggcggacctgacgcccacgggcagcggcccgctggtgccgcccatg
gtcaccctccagatcatcggcggccgcaaggagaagatccgcgcgggcgacgtgctgggc
gcgctgactggcgatatgggctacacccgtgaacaggtgggcaagatcaacgtgaacgac
ttctcaacctacgtggccgtggatcgcgccatcggcgcgcaggccgcccagcgcctgaac
cagggccgcgtgaagggcaagaccgtgaaggcgcggctggtgagcggaaaccagaaattt
gagtga
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