Acidovorax sp. KKS102: C380_22055
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Entry
C380_22055 CDS
T02290
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ack
Acidovorax sp. KKS102
Pathway
ack03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C380_22055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ack03400
]
C380_22055
Enzymes [BR:
ack01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C380_22055
DNA repair and recombination proteins [BR:
ack03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C380_22055
Prokaryotic type
C380_22055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFU48103
LinkDB
All DBs
Position
complement(4792491..4793207)
Genome browser
AA seq
238 aa
AA seq
DB search
MNPSEMPTTQLQTAQPTDWPVAPGWQPLVDAFFAGARGQALLAFLQARLQAGAAIFPPQP
LRALELTPPEEVRVVILGQDPYHGRGQAEGLAFSVAPGVRLPPSLQNIFKEMQRDLGVAF
PPFPNPGGSLVKWAKNGVLLLNTCLTVEEGQAASHAGKGWEELTDTVIRHVAEGPRPVVF
MLWGSHAQSKRAWIPADRGHLVLTSNHPSPLSALRPPVPFIGNGHFGKARDFRAQHGY
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctctgaaatgcccaccacgcaactccagacggcccaacccaccgactggccg
gtagccccgggctggcagcccttggtggacgctttttttgccggcgcgcgcgggcaggca
ctgctcgcgtttttgcaggcacggttgcaggcgggggcggcgatttttccgccccagccg
ctgcgcgcgctggagctgacgccgcccgaggaggtgcgcgtggtcatcctcgggcaggac
ccgtaccacggccggggccaggccgaggggctggcgttttctgtcgcgcccggcgtgcgc
ctgccgccctcgctgcagaacatcttcaaggagatgcagcgcgacctgggagtggccttc
ccccccttcccgaacccgggcggcagcctggtcaagtgggccaaaaacggcgtgctgctg
ctcaacacctgcctgacggtcgaagagggccaggccgccagccatgcaggcaaaggctgg
gaggagctgaccgacaccgtcatccgccacgtggccgagggcccgcgcccggtggtgttc
atgctctggggctcgcacgcccagtccaagcgggcgtggattcccgccgaccgggggcac
ctggtgctcacctccaaccacccctcgccgctgtcggcgctgcgcccgccggtgcccttc
attggcaacgggcattttggcaaggcgcgggattttcgcgcgcagcacgggtattga
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