Acidovorax sp. KKS102: C380_22415
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Entry
C380_22415 CDS
T02290
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ack
Acidovorax sp. KKS102
Pathway
ack03030
DNA replication
ack03430
Mismatch repair
ack03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ack00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C380_22415 (holA)
03430 Mismatch repair
C380_22415 (holA)
03440 Homologous recombination
C380_22415 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ack03032
]
C380_22415 (holA)
03400 DNA repair and recombination proteins [BR:
ack03400
]
C380_22415 (holA)
Enzymes [BR:
ack01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C380_22415 (holA)
DNA replication proteins [BR:
ack03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C380_22415 (holA)
DNA repair and recombination proteins [BR:
ack03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C380_22415 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Ig_Eae_1st
Rv1486c_C
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AFU48175
LinkDB
All DBs
Position
complement(4874679..4875734)
Genome browser
AA seq
351 aa
AA seq
DB search
MQVALAQLSQHLQRGLSPLYVLHGDEPLLQQEAADAIRATARTQGYTERSSYTVAGAHFD
WSAVLAAGGSLSLFADKQIVEIRIPSGKPGKDGSVALQQIAESARGNDSTLTMVMLPRLD
KATKTGAWFAALEGNGVSIQIDPIERGQLPQWIAQRLAQQGQRVVAGEEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPAGELTQAQVEAAVLNVARYDVFKLSESVLAGQTARVQRML
DGLQAEGEAEVLVHWALAEDIRALKRVKDAMNAGRPLPMALRENRIWGPKERLFERILPK
ASDAALARLLQSAHTVDGIVKGLKQPDWPQDGWQALQRLALQLCRLTSAAR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcgccctggcccaactctctcagcatcttcaacggggcctgtcgccgctgtat
gtcctgcatggcgacgagcccttgctccagcaagaggcggccgacgccatccgcgccaca
gcccgcacgcagggctacaccgaacgcagcagctacaccgtggcaggagcccactttgac
tggagtgcggtgctggcagctggtggctcgctcagcctgtttgccgacaagcagatcgtc
gagatccgcatcccctcgggcaagcccggcaaggacggcagcgtggcgctgcagcagatc
gctgaatcagcccggggcaacgacagcaccctcaccatggtcatgctgccgcgcctcgat
aaagccaccaagaccggcgcctggtttgccgcgctggagggcaacggcgtctccatccag
atcgaccccatcgaacgcggccagctgccgcagtggattgcccagcgactggcccagcaa
ggccagcgcgtggtggcgggcgaagaaggccagcgcaccctgcagttttttgccgaccgc
gtggaaggcaacctgctggccgcgcaccaagagattcaaaagctcgcgctgctgcacccg
gcgggtgaattgacgcaagcccaggtcgaagccgccgtcctcaacgtggcgcgctacgac
gtgttcaagctgtccgaatccgtgctggccgggcagacggcccgcgtgcagcgcatgctc
gacggcctgcaggccgagggcgaggccgaagtgctggtgcactgggcgctggccgaagac
atccgcgccctcaagcgcgtaaaggatgcgatgaacgccggccgccctctgcccatggcc
ctgcgcgagaaccgcatctggggccccaaggagcggctgtttgaacgcatcctgcccaag
gccagcgacgccgccctggcgcgcctgctgcagtcggcgcacacggtggatggcatcgtc
aaaggcctcaagcagcccgactggccgcaagacggctggcaggcgctgcagcgcctggcg
ctgcaactgtgccgcttgaccagcgcggcccggtga
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