| Entry |
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| Symbol |
srmB1
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| Name |
(GenBank) DEAD box ATP-dependent RNA helicase
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| KO |
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| Organism |
acl Acholeplasma laidlawii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:acl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACL_0432 (srmB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:acl03019]
ACL_0432 (srmB1)
03009 Ribosome biogenesis [BR:acl03009]
ACL_0432 (srmB1)
Enzymes [BR:acl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACL_0432 (srmB1)
Messenger RNA biogenesis [BR:acl03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACL_0432 (srmB1)
Ribosome biogenesis [BR:acl03009]
Prokaryotic type
rRNA helicases
ACL_0432 (srmB1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
450953..452596
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| AA seq |
547 aa
MAILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIP
MVEKTDTSLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELD
RKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPETRQT
VLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFE
NPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATD
VAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHY
TKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHLEAIKELLVDEGSKDQLLNYL
LDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNI
GKADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRK
VVIKTLN |
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| NT seq |
1644 nt +upstreamnt +downstreamnt
atggcaattttatttaacgatttaccaatattagatacaacaaaagtagcattagaaaaa
ttaggttttactgaagctacaccaatacaggaacaagcaattccaaagatgattttaggt
ttagacttaatcggtcaagctcaaacaggaacaggaaagacatttgcttttggcataccg
atggtcgaaaaaactgatacatccttaagacaaactcaaggtttaattttaactccaact
agagaattaacaaatcaagtgtacaaagagattattaaattagtgaagttttacccagaa
ttaagagttacaaccatcgttggtggtgagtcctatgaaaaacaattcaaggaactagac
agaaaaccacatatcattgttgcaacaccaggacgtattattgatcatatcgatcgaggt
acagtggatttatcacacattacaacacttacattagatgaagctgatgaaatgttaaaa
atgggtttccaagatgatatcgaacgcattctacaaacaacaccagaaacacgtcaaact
gtattattttctgcaacaatgccagcatttattaaaaagatagctaaaaactatcaaaaa
aatcctgagcttattaaaattgaagcaaaaagtttaacagttgatcgtattactcaagct
tacttcttagttaaagaaaaagaaaaacaaagtttattagaacgtctattagattttgaa
aatccatcaactgcaattatttttgtgaatacaaaagcaggtgcggatagaattactgaa
agtttacaaaaagcaggatttactgcggatgcacttcatggtgacttaaaacaatcacaa
cgtacatacgttatgaatcgttttagaagtaaacaactatctatcttagtagcaacagac
gttgcagctagagggttagacgttgatgatgttgaaattattgtaaactatgatttacct
caacaagatgaaatctatgttcaccgtattggccgtacaggtcgtgctggtaaaaaaggt
aaagcattcacatttgttacaccacttaaacgtcgtatgttagatatgttagctcactac
actaaagcagatattaaacgcttagaagtgccaacagctgatgatgtttacaaagaacaa
cttaaaacatttaaacataaaattaaaactgaactagcaaatgaatatccaaaccattta
gaagctattaaagaattattagtggatgaaggttctaaggatcaactattaaattactta
ctagacagcatgctgcctactaaaaaaacttacgaaacaattgaaatcattcctgaaaaa
gcatcaagaagaagtcaagatgaaagaggaaatgacaaaggtagaaaagattcaagatca
tcaagagatgcttcaccagctcgtggcagtggccaatatgttgacttcactctaaatatc
ggtaaagcagatggactaacacctccgacactatttaaattcatggaaaaagaatatggt
atcttctctaaaaatattggcgatattagacaccataaaaacgaaacagttttcggactt
agaaaagattctgtaagacgtcttaatgcaaaaaaagaagtgaattataaaggtagaaaa
gtagttatcaaaacattaaactaa |
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