Acholeplasma laidlawii: ACL_0512
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Entry
ACL_0512 CDS
T00659
Symbol
srmB2
Name
(GenBank) ATP-dependent RNA helicase, superfamily II
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acl
Acholeplasma laidlawii
Pathway
acl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACL_0512 (srmB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acl03019
]
ACL_0512 (srmB2)
Enzymes [BR:
acl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACL_0512 (srmB2)
Messenger RNA biogenesis [BR:
acl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACL_0512 (srmB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_19
Arm_3
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABX81130
UniProt:
A9NFK0
LinkDB
All DBs
Position
535699..537045
Genome browser
AA seq
448 aa
AA seq
DB search
MKFSELNIIERIQKALTLSGYEAPTAIQEQAIPILLSGQDLLGSAQTGTGKTAAFAIPIL
QKIYETKEHKAPRKVQALILTPTRELALQIHENVKIYAKYLNIISTTIYGGVSQKRQEEA
LKRGVDVVIATPGRLLDLMNQKIISLQDVRYLVLDEADQMLDMGFIKDVTSIVDKTPKKR
QTMLFSATMPKQIEVLSKQILVNPERIAVTPVTQTLDAITQSVYMVNKANKTLLLIDLIY
TLNMKSVLVFTKTKHGANKLVKNLMNLGIESEPIHGSKSQAARERALANFKKGKTKILVA
TDIAARGIDIEALDYVINFELPEVPETYIHRIGRTGRAGLSGMALSLVDPSEQKLLTQVE
KHINSKIEAVGHKYQIQSQPKQREVITDKLKTDTSKKQEKPKKELPDYLKFKGHKPKPKK
KKSEDKSFVNYQKKTNPYFQTKKSNKKK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaattaaacattatagaacgtattcaaaaggcattaaccttatcggga
tatgaagcgccaactgcaatacaagaacaggctatacctatcttattaagcggtcaagac
cttctgggtagtgctcaaactggaaccggtaaaacagctgcatttgcgataccaatctta
caaaaaatatatgaaacaaaagaacataaggcaccaagaaaagtacaagcacttatacta
accccaactagagaactcgcacttcaaatacacgaaaatgttaagatatatgcaaaatat
ctaaatattataagtaccactatttatggtggtgtatcacaaaaaagacaagaagaagca
ctaaaacgtggtgtagatgttgtgattgcaacaccgggccgattacttgatttaatgaat
caaaaaataatatcattacaagatgtaagatatcttgtacttgatgaggcagatcaaatg
ttagatatgggctttattaaagatgtaacaagcattgttgataaaacacctaagaagcgt
caaacgatgctgttttcagcaacaatgcctaaacaaattgaagtcttatcaaaacaaatc
ttagtaaaccctgaaagaattgctgtaacaccagttacacaaacactggacgcaattact
caaagtgtttatatggtgaataaagcaaataaaacattattattaattgatttaatttat
actttaaatatgaaatcagttttagtgtttacaaaaacaaaacatggtgccaataaactt
gttaaaaatttaatgaatttaggtattgaatcagaacccatacacggtagtaaatcacaa
gctgctagagaacgcgctttagcaaactttaaaaaaggcaaaactaaaatcttagttgcc
acagatattgcagcccgtggtatagacattgaagcacttgactatgttataaactttgaa
ctacctgaggtaccagaaacctatattcaccgaattggtagaacaggacgtgctggttta
agtggtatggcattatcacttgttgatccttctgagcaaaaactgcttactcaagtagaa
aagcatataaattctaaaattgaagctgttggacataagtaccaaattcaatcacaacca
aaacaaagagaagtaataactgataagctaaaaaccgacacatcaaaaaaacaagaaaaa
ccaaaaaaagaattgcctgattacttaaagtttaaaggtcataaacctaaacctaagaag
aaaaaatcagaggataaatcttttgtaaattatcaaaagaaaacaaacccatattttcaa
actaaaaaatcaaacaagaaaaagtaa
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