Algirhabdus cladophorae: ACIRQ6_00065
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Entry
ACIRQ6_00065 CDS
T10905
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acld Algirhabdus cladophorae
Pathway
acld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIRQ6_00065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acld03019
]
ACIRQ6_00065 (pnp)
03016 Transfer RNA biogenesis [BR:
acld03016
]
ACIRQ6_00065 (pnp)
Enzymes [BR:
acld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACIRQ6_00065 (pnp)
Messenger RNA biogenesis [BR:
acld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACIRQ6_00065 (pnp)
Transfer RNA biogenesis [BR:
acld03016
]
Prokaryotic type
tRNA degradation factors
ACIRQ6_00065 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XKD82533
LinkDB
All DBs
Position
complement(13307..15439)
Genome browser
AA seq
710 aa
AA seq
DB search
MFNVTKKSIEWGEETLTLETGKVARQADGCVIATLGETSVMCAVTFAKAQKPGQDFFPLT
VHYNEKYYAAGKVPGGFFKREARPTEKETLTSRLIDRPLRPLFVPGFKNEVLVICTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAAARVGFVDGEYILNPEIDDMHDLRNKPDQR
LDLVVAGTKDAVMMVESEAYELSEDEMLGAVNFAHEQIQPVIDLIIDLAEDCAKEPFDFQ
PADYSELSAAVAKAGEKEMRAAFAIGDKQERTTAVAAARDTIKAALSEEQLGDANLGSAM
KGLEAGILRGDVVKTGKRIDGRKTDEIRDIVSETGFLPRTHGSALFTRGETQGLVVTTLG
TGDDEQMIDALHGTYKSNFMLHYNFPPYSVGEVGRFGPPGRREIGHGKLAWRALQAVLPA
ATDFPYTVRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSSVAGVAMGLIMEDNGDYA
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITPEIMGKALAQAKDGRMHILGE
MSKALTGAADFSIHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGDSIKKAYDMIYSIVAEPEAGAIYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKIVDQETGEEIVEEKSED
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgtaacgaaaaaatcaatcgaatggggtgaagaaaccctaacactagagaca
ggcaaggttgcccgtcaggcagatggctgtgtcatcgccactttgggtgaaaccagcgtc
atgtgcgcggtgacattcgcaaaagcacaaaagccgggtcaggactttttcccgctgacc
gtacactacaacgaaaaatactacgcagccggtaaagtaccgggcggctttttcaaacgc
gaagcgcgtccgactgaaaaagaaaccctgacaagccgtctgatcgaccgccccctacgc
ccgctgttcgtccctggcttcaaaaacgaagttctggtgatctgtactgttctgtcgcac
gatctggtcaacgaccctgacatggttgcaatgatcgcagcctctgccgctttgacaatc
tccggcgccccgttcatgggcccgatcgcggcagcgcgtgttggttttgtggatggcgaa
tacatcctcaacccagagatcgacgacatgcacgatctgcgcaacaagccagatcaacgt
ctggatcttgttgttgctggcacaaaagacgccgtgatgatggttgaatccgaggcttat
gaattgtccgaggacgaaatgctgggggctgtgaactttgcccacgagcaaatccaacca
gtgatcgatctgatcattgatctggccgaagattgcgcgaaagagccgttcgatttccaa
cctgcagattacagcgagctgtccgcagccgttgcaaaagctggtgagaaagaaatgcgc
gccgcttttgcaatcggtgacaagcaagagcgtacaactgcggttgcagctgcgcgtgat
acgattaaagcagctttgtccgaagagcagctgggcgatgcgaacctcggttctgccatg
aaaggcctcgaagctggcattctgcgtggcgacgttgtgaaaactggcaagcgtatcgac
ggtcgtaaaaccgacgagatccgcgatatcgtctctgaaactggctttttgccacgcaca
cacggttcggccttgttcacacgtggtgaaacccaaggtctggtcgtgaccactttgggc
acaggcgacgacgagcaaatgatcgacgcgctgcacggcacatacaagtcgaactttatg
ctgcactataacttcccaccctattcggttggtgaagtcggtcgctttggccctcccggt
cgtcgtgaaattggtcacggtaaattggcatggcgtgcgttgcaggcggttctgccagca
gccactgatttcccgtacaccgtgcgcgttgtatccgagatcacagaatccaacggctcg
tcctcaatggcgtccgtttgtggtggttcgttgtcgatgatggatgcgggcgttccgttg
aaatcctcggttgctggtgtggctatgggtctgatcatggaagacaacggcgactatgcc
atcttgtccgacatcttgggtgacgaagatcacttgggcgacatggacttcaaagtggcc
ggtacagaagccgggatcacatccttgcagatggacatcaaaatcgcaggcatcacgccc
gagattatgggcaaagccttggcacaagccaaagacggccggatgcacatccttggtgaa
atgagcaaagctctgacaggcgctgctgacttcagcatccacgccccacgcatcgagacc
atgcaggtgccaacggataaaatccgcgaagtcatcggttctggtggtaaagtgatccgc
gaaatcgttgaagtgtccggcgcgaaagtggacatcaacgacgaaggcatcatcaagatc
gcatcgccaaatggcgacagcatcaaaaaagcctacgacatgatctattccatcgtggcc
gaaccagaagctggtgcgatctacacagggacagtcgtgaaaatcgtcgatttcggcgca
ttcgtgaacttctttggcaagcgtgacggtttggtccacgtatcccaaatcgaaaaccgt
cgtttgaaccacccttccgacgtcctcaaagagggccaagaagtgaaggtcaaactgttg
ggctttgatgatcgcggcaaagtgcgcctgtcgatgaaaatcgtcgatcaggaaactggc
gaagagatcgtagaagagaagtcggaagactaa
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