Algirhabdus cladophorae: ACIRQ6_00105
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Entry
ACIRQ6_00105 CDS
T10905
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acld Algirhabdus cladophorae
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acld03016
]
ACIRQ6_00105 (truB)
Enzymes [BR:
acld01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACIRQ6_00105 (truB)
Transfer RNA biogenesis [BR:
acld03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACIRQ6_00105 (truB)
Prokaryotic type
ACIRQ6_00105 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XKD82540
LinkDB
All DBs
Position
complement(21493..22416)
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AA seq
307 aa
AA seq
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MGRKRKGRPVSGWVIIDKPAGITSTSVVNKVRWAFNAQKAGHAGTLDPEATGILAVALGE
ATKTVPYITDALKAYEFMVNLGAATNTDDAEGEVIARSNQRPSDAELTEALHGFIGDIQQ
VPPQFSAVRVDGQRAYALARKGEEMALAERDLYVDELILLDRPNPDTALLRMVCGKGGYV
RSIARDLGEDLGCLGHVAWLRRLWSGPFDIADAVTLDQIDALAKDPAIDQFLQPTELGLA
DVTQVHCPATSIAALRNGNPAQVIANDVDYGDTVWACSEGQAIAVGIYKAGQIHPTRVFV
PSANVDV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtaaacgcaaaggtcgccccgtatcggggtgggtcatcatcgacaaacctgct
gggatcacatccaccagcgtggtcaacaaagtgcgctgggcgtttaacgctcaaaaagcg
ggacacgcaggcaccttagaccccgaggccactggcattctggcagtagccttgggggag
gccaccaaaacggtgccttatatcaccgatgccctaaaggcctacgaatttatggtgaac
ctaggtgcagcaacaaacacagacgacgccgagggcgaagttattgccagatcaaaccag
cgcccatctgacgccgaattaacagaggcgctgcacggtttcataggcgacatccagcag
gttccaccgcaattttctgccgtgcgcgttgacgggcagcgcgcctatgccttggcccgc
aaaggcgaagaaatggcattggccgaacgcgatttatatgtagacgaactgatccttttg
gatcggcccaacccggacacagcccttttgcggatggtctgtggaaaaggcgggtacgtt
cgatcaattgcgcgggatctgggcgaggatctgggctgtttgggtcacgtcgcctggctc
agacggttatggtcaggcccatttgacatagcagatgccgtgaccttggatcaaatagac
gcgctggccaaagaccctgcgatcgatcagttcttgcagccaactgaattgggccttgcg
gatgtgacccaagtgcactgccccgcgaccagcattgccgcattgcgcaatggcaatcca
gcgcaggtaatcgcaaacgatgtggactacggcgatacggtctgggcctgctcagaaggt
caagcgatcgcagtgggcatttacaaggcgggtcaaatccaccccacacgggtgttcgtg
ccctccgcgaatgtcgatgtttga
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