Algirhabdus cladophorae: ACIRQ6_00490
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Entry
ACIRQ6_00490 CDS
T10905
Name
(GenBank) SdrD B-like domain-containing protein
Organism
acld Algirhabdus cladophorae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
CarboxypepD_reg
SpaA
Big_9
Cadherin
Alpha-amylase_C
CarbopepD_reg_2
TED
He_PIG
Endotoxin_C
Cyc-maltodext_N
NusG_II
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
XKD82607
LinkDB
All DBs
Position
complement(99454..103938)
Genome browser
AA seq
1494 aa
AA seq
DB search
MTYHYKEWTAFTEADLLATASGSKSWTINKGDTFTMPGSASVTLSTYDNDRTLSGDNWRN
DNANDRSGQYASVDGERVGSQMYAESYHILRGSDGKTYYMIEIEVEGHDAAGAGDDYFSF
YGSVPPAGVQLTVAGTCNVTGCWVDYSCLSAGDMAPANTPPTFTNVPEDGIICVDENTTF
VINLNSDDVDGDTVTYSITGGADASSFEIDAHTGELTFVGAPDFENPTDGNGNNTYDVTV
TVTDEHGASTEKAMWIKVKDVPECDEPVCIVIEAESMHLNGFHAVGGANASDDCLVKINC
LGGTGDISTTFAGPSGTYDLTVFAQDESDGQSVIMVKINGEVVGTINLDQDNNGGGSNNG
HFSEFTVDDIQINTGDTVTLWAQSDRGEFVRIDKIELCQDGEVCDEKLDFEGVGAGTVVS
TQFAGVTISAQRDDNNTAANDAMIFDSNNPTGGDHDLGYTGRGNILIISEDNDSSDPDDA
IGGSITFDFDNPSDLQSIVLLDIEENGGTIELTLADGSTQSIAIPAAGNNSAQTVTLNAT
DVTQMVINLAGSGAVDDLCWSPGEAPQTASLGGVYFMDVNDNSVQDADDMAVVGGTVVLF
QDGVEVARQDTGADGSYLFEDLTPGDGYTVEFLDTGEGKTFVDADQGGNDTIDSDVTSVT
GGNGSTGTISLAAGEDKRNVDGGIEDPGTSSLAGRVFIDSDDDNDDNNNGDETGIGGVTV
KLLDGNGNPVLDGAGVAITTETNADGSYEFTGLDAGQYQVMFDTNDTDLGGRTLVTQNAG
VDDTSDSDVGADGMTQVVTLGINDREEDLDMGVEDPGTSSLAGRVFIDSDDDNDDNNNGD
ETGIGGVTVKLLDGNGNPVLDGAGVAITTETNADGSYEFTGLDAGQYQVMFDTNDADLGG
RVLVDQNAGVDDTSDSDVGADGMTQVVTLGINDREEDLDMGVEDPGTASLGGRYFCDDDD
DGVQGQNDTAIVAATVVLLLNGVEIDRMETDENGNYLFENLDAADGYQVQFLDTETGKQF
VAADVGQDDTVDSDVTNVVDGNGVTDTISLEIGEDKRNVDGGIVDPGTASLGNKLFIDAN
GNGLQDDGEVGVDGVTVTLTDGNGNTTTTVTANGGMYLFDGLNAGSYSVEFDDVDTFVFT
SQDAGDDALDSDVDANGVTASYTLAVGEENLTVDAGLVSADPTMMDDMAMTCADEEKTVD
VLSNDVDTGPLTITSINGIAIAEGETVETAAGTFVTLMGGELVIDGETAYAGLDIGESAV
ETITYGVSDGQGGAGTADLAMTFCGDANTVDSLIGSLPANLIEYQLQAGNVNSPVEDFGW
DLKIVNADDARLDGITFTNAYCLSIRDPAADSDTFATAPVVTGDMYGTDEIGSGFFNSNQ
VSFANGLAAGENMDIVNWILNEDFEGQGYTGWEVQRAIWEFTDSFDTDILSASDAGYGDD
AAVDAIVALALGQDGFEAGVGDIIGVIVDPNPVTGSNAQPFIIGMKFEDYDCIC
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcattataaagaatggactgcgttcacggaggctgaccttctggcaacagcg
tccggcagcaagtcctggaccatcaacaaaggtgacacgttcaccatgccaggatccgct
tcggtcactttgtcgacttacgacaacgaccgtaccttgtctggcgacaactggcgcaac
gacaatgccaacgaccgctctggccaatatgccagtgtcgatggcgaacgcgtcggcagc
cagatgtatgcggaaagctatcacatcctgcgcggctctgacggcaaaacatactacatg
atcgaaatcgaagtcgaaggtcacgacgctgctggcgctggcgacgattacttctcgttc
tatggctcggttcctcctgccggcgttcaattgactgttgcaggcacatgcaacgtcaca
ggctgctgggtggattattcctgcctgtccgctggtgacatggcccctgccaacactccg
cccacattcacaaacgtgccagaagacggcatcatctgcgtggacgagaacacaacattc
gtcatcaacctcaacagcgacgatgtagacggcgacacagtgacatattcgatcactggc
ggcgctgacgcgtcttcttttgaaatcgacgcccacacaggcgagctgactttcgttggc
gctcctgatttcgaaaacccaacagacggcaacggcaacaacacatatgatgtgactgtt
actgtgacggacgaacatggtgcctctactgagaaggccatgtggatcaaagtcaaagac
gttcctgaatgcgacgagcctgtctgcatcgtgatcgaagcagaatcgatgcacctcaac
gggttccacgctgttggcggcgcaaacgcatcggacgattgcctggtgaaaatcaactgc
ctcggcggtacaggcgatatttcaactacatttgctggtccatcaggcacatatgatctg
actgtgttcgcacaggacgaaagcgatggccaatcggtcatcatggtcaaaatcaacggc
gaagttgtcggcaccatcaatctggaccaagacaacaacggcggcggttctaacaacggc
cacttctccgagttcacagtagacgacatccagatcaacactggtgacactgtcactctg
tgggcccaaagcgatcgcggcgaattcgttcgcatcgacaagatcgaattgtgccaagac
ggtgaagtttgtgacgaaaaactggactttgaaggcgttggcgctggtacagttgtatcc
acgcagtttgctggtgtgacgatctctgcacagcgtgacgacaacaacactgctgccaac
gacgcaatgatctttgacagcaacaacccgacagggggcgatcacgaccttggttacaca
ggccgcggcaacatcctgatcatttccgaagacaacgacagttctgaccccgatgacgca
atcggtggttcgatcacgtttgactttgacaacccatccgatctgcaaagcatcgttttg
ttggatatcgaagaaaatggcggcacaatcgagctgacattggctgacgggtccacacaa
tccatcgcgatccctgcggcgggcaacaactctgcccagaccgttacattgaacgcgaca
gatgtgacacagatggtcatcaacttggccggttccggtgcggttgacgatctgtgctgg
tccccaggtgaagccccacaaacagcatcgctgggtggtgtgtacttcatggatgtcaac
gacaactctgtccaagacgcagacgacatggccgttgttggcggcacagttgtgctgttc
caagacggtgttgaagtggcccgtcaggacacaggcgccgatggctcctacctgttcgaa
gacctgacaccgggtgacggctacacagttgagttcctcgatacaggcgaaggcaaaaca
tttgtcgacgctgaccaaggtggcaacgacacaatcgacagcgacgtgacatcggtcaca
ggtggcaatggttcaaccggcaccatctccttggctgctggcgaagacaagcgtaacgtc
gatggcgggatcgaagatccaggcacttcttccttggcgggtcgtgtgttcatcgacagt
gatgacgacaacgacgacaacaacaatggcgacgaaactggtatcggcggcgtcactgtt
aagctgttggatggaaacggaaatcctgttctggacggtgctggtgtggcaatcacaaca
gaaaccaacgcagacggatcttacgagttcacaggcttggacgcaggtcagtaccaagtg
atgttcgacacaaacgacactgatttgggcggccgtacattggtcacacaaaacgctggt
gtggacgatacatccgacagcgacgttggcgcagatggcatgacgcaagttgtgacattg
ggcatcaacgaccgtgaagaagatctggacatgggcgtcgaagaccccggtacatcttcc
ttggccggtcgtgtgttcatcgacagcgacgatgacaacgacgacaacaacaatggcgac
gaaaccggtatcggtggcgtgactgttaaactgttggacggaaacggaaatcctgttctg
gacggtgctggcgttgccatcacaaccgaaaccaacgccgatggctcttacgagttcaca
ggcttggacgcaggtcagtaccaagtgatgttcgacacaaacgacgctgatttgggtggc
cgcgtattggttgaccaaaacgcaggtgttgacgacacatccgacagcgacgttggcgca
gatggcatgacgcaagttgtgacattgggcatcaacgaccgtgaagaagatctggacatg
ggcgtcgaagaccccggcacagcctccttgggtggtcgttacttctgtgacgacgacgat
gatggtgtccaaggtcaaaacgacactgccatcgtagccgcgacagttgtgttgttgctc
aacggtgtcgaaatcgaccgtatggagactgacgaaaacggaaactacctgttcgaaaac
ctcgatgcagctgatggctatcaggttcagttccttgacactgaaactggcaaacagttc
gttgcagccgatgtaggccaagacgacactgtcgacagcgacgtgacaaacgttgtggac
ggcaatggcgtgaccgatacgatttccttggaaatcggcgaggacaagcgcaacgttgat
ggcggtattgttgatccgggcacagcatctttgggcaacaaattgttcatcgatgccaat
ggtaacggtctgcaagatgacggcgaagttggtgtagacggtgtgactgtcacgttgaca
gacggcaacggcaacacaaccacaaccgtgacagccaatggcggcatgtacttgttcgac
ggtctgaacgctggatcctactcagttgaattcgacgacgttgatacattcgtctttacc
agccaagacgccggtgacgatgctttggacagcgacgtagatgcaaacggtgtgaccgct
tcctatacattggctgttggcgaagagaacctgacagtggatgcaggcttggtctcggct
gatccaaccatgatggacgatatggccatgacatgcgcggacgaagagaaaaccgtcgat
gtgctttcgaatgacgtggacaccggcccgctgacgatcacttcgatcaacggtattgcc
atcgctgaaggcgaaacggtggaaactgccgctggcacattcgtgaccctgatgggcggc
gagttggtcatcgatggtgaaacagcctacgcaggtttggacatcggcgaaagcgcggtt
gagaccatcacatacggcgtatccgatggtcaaggcggggccggcactgccgacctggca
atgaccttctgtggcgatgcaaatactgttgatagccttatcggtagcctaccggccaat
ctgatcgaatatcagctgcaagctggtaacgtgaactcaccggttgaagactttggctgg
gatctgaagattgtgaatgccgacgacgctcgtctggacggtatcaccttcaccaacgcc
tattgcctcagcattcgtgaccccgccgccgacagcgatacattcgccactgcgccggtt
gtcacaggcgatatgtacggtactgacgaaatcggatctgggttctttaactcaaatcag
gtgtcatttgccaatggtctggccgctggcgagaacatggacatcgtcaactggatcctc
aacgaagacttcgaaggccaaggctacactggttgggaagttcaacgcgcaatctgggaa
ttcacagatagctttgatacagacatcttgtctgcgtctgacgcaggctatggcgacgac
gctgcagttgatgcaatcgttgctctggcccttgggcaagacggtttcgaagcaggcgta
ggtgacatcattggtgtgatcgttgatcctaacccagtaactggttcgaatgctcaaccg
ttcatcatcggtatgaaattcgaagattatgactgcatctgctga
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integrated database retrieval system
