Algirhabdus cladophorae: ACIRQ6_03540
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Entry
ACIRQ6_03540 CDS
T10905
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acld Algirhabdus cladophorae
Pathway
acld03030
DNA replication
acld03430
Mismatch repair
acld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACIRQ6_03540 (dnaE)
03430 Mismatch repair
ACIRQ6_03540 (dnaE)
03440 Homologous recombination
ACIRQ6_03540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acld03032
]
ACIRQ6_03540 (dnaE)
03400 DNA repair and recombination proteins [BR:
acld03400
]
ACIRQ6_03540 (dnaE)
Enzymes [BR:
acld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACIRQ6_03540 (dnaE)
DNA replication proteins [BR:
acld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACIRQ6_03540 (dnaE)
DNA repair and recombination proteins [BR:
acld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACIRQ6_03540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XKD83195
LinkDB
All DBs
Position
735293..738796
Genome browser
AA seq
1167 aa
AA seq
DB search
MSTATRFIHLRMHSEYSLLEGAMRVKKLPALAAELDMPALALTDTNNMFAALEYSEGMSK
AGVQPIIGCQIDLTYDPAAQGEKPRDPAGLVLLAQTETGYENLMKLNSCLYLDSDGQLPQ
VTLDDLASYNADVICLTGGPDGPLGRLLRGGQRPKAEALLQRLQQIFGDRLYVELQRHPG
EDGSAPEAERLTEQGHVELAYGMGLPLVATNDVYFPNAEMYEAHDALICISEGAYVDQQE
PRRRLTPQHYFKTPQEMAVLFADLPEALENTVEIARRCAFKAYKRDPILPKFADDEVVEL
RRQANEGLQNRLAVIPHAASVEEYQKRLDFELDIIEGMGFPGYFLIVADFIKWAKDENIP
VGPGRGSGAGSLVAYALTVTDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQEKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKAL
ADEPRLREEAKNEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSD
MPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDLILQSGRDLHVRADGTELYKPAEGT
LNDINAIPLDDEASYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGP
MENIPQYCDVKNDRAERERLHPSIDHILDETQGIIVYQEQVMQIAQEMAGYSLGGADLLR
RAMGKKIQEAMDAEKPKFLAGSAENGVDEKKAKEVWDLLDKFANYGFNKSHAAAYAVVSY
QTAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVKKGLDLPYVPPCVNRSQATFNVHEG
ALVYGLGALKNVGVDAMGLVVAGRGDKPFVTLFDFARRVDLKRVGKRPMEMLARAGAFDV
LDANRRRVFDSLDGLVNYSSAIHDQRNSNQVSLFGEAGDDLPEPRLSPVSDWLPAERLAE
EFKAIGFFLSGHPLDDYSAPLKRKGIVTLDEVTEKARSGACIAKMAGYVAGRQERKSARG
NRFAFVQLSDTTGGFEVTMFSDTLEVARDHLDTGSKVVLTVEATMESDQLKLLARSVTPI
DTMVADAGSTGLRVYVEDQEAIMPVAGVLQNAAETIKQGGKGPIIFCLLDEKLPGEVEMQ
LPQDYPMTPQIKGAIKSLEGVVMVEDI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctacacgattcatccatttgcgcatgcactccgaatattcgttgctggaa
ggcgcgatgcgggtcaagaaattgccggcactggccgcggagttggacatgcctgcgctg
gcattgaccgacaccaacaatatgttcgcagcgctggaatattcagaagggatgtccaag
gcgggtgtgcagccgatcattggctgtcagatcgacctgacctatgaccccgccgcccaa
ggcgaaaagccacgcgatccagcaggccttgttttactggcgcaaaccgagacaggttat
gaaaacctgatgaagctaaactcctgtctgtatctggacagtgacgggcagttgccgcag
gtgactttggacgatttggcgtcttacaatgccgatgtgatctgcctgacgggcggtccg
gatgggccactgggcaggctattgcgcggcggtcaacgcccgaaagcagaggctctgttg
cagcgcttgcagcagatttttggcgacaggctctatgtggaattgcaacgtcatcccggt
gaggatggcagcgcccctgaggccgagcggttgactgaacagggtcatgtggaattggcc
tatgggatgggtctgccattggtggcgacaaacgatgtgtatttcccaaatgccgagatg
tatgaggcccatgatgcgctgatctgcatttccgaaggcgcctatgtggaccagcaagaa
ccgcgtcgccggttgaccccgcagcactatttcaaaacgccacaggagatggcagttctg
tttgcggatctaccggaagcccttgaaaatacggttgaaattgcgcgccgttgtgcgttc
aaagcctacaagcgcgatccgatcctgccgaaatttgccgatgacgaagtggtagaactg
cgccgccaagccaatgaaggcctgcagaaccgtttggccgtgatcccccatgcagcgtcc
gtggaagagtatcaaaagcgcctcgatttcgagctggatatcatcgaaggcatggggttc
ccgggctactttttgattgttgctgactttatcaaatgggccaaggatgaaaacataccc
gtgggccccgggcggggatccggtgcgggcagtctcgtggcctatgcgctgaccgtgacc
gaccttgatccattgcggtattccttgctgttcgagcgtttcttaaacccagaacgcgtg
tcgatgcccgactttgacatcgacttttgcatggaccgtcgtgaagaagtcatccgctac
gttcaggaaaaatatggtcgcgacaaagtgggccagatcatcacctttggggccttgctg
tccaaggccgccgtgcgcgatatcggccgcgtgttgcagatgccctatggccaagtggac
cgcttgtcgaagatgatccctgtggaaggggtcaaacctgtttccatcgaaaaggccctc
gcagacgagccgcgcttgcgcgaagaggccaagaatgaagaagttgtcgaccgtttgctg
acctatggtcaacaggtcgaagggctgttgcgcaatgcctcgacccatgcggcgggtgtg
gtgatcggcgaccggccgctggatgcattggtgccgctgtaccaagatccgcgatccgac
atgcccgccacgcagttcaatatgaaatgggtggaacaggccggattggtcaagttcgac
tttttgggcctcaaaactctgacagtgattcagaacgctgtggatttgatcctgcaatcg
ggtcgtgatctgcatgtgcgagctgacgggaccgagctttataaacctgcggagggaacg
ctgaacgacatcaacgcaatcccgctggatgatgaggcgtcgtacaaactgtatgcctcc
gccaaaacggttgcggtattccaagttgaatccagcggcatgatggatgcgctcaagcgg
atgaaacccacctgtatcgaggacatcgtggcccttgtggcgctgtaccggcccggtccg
atggaaaacattccgcagtattgcgatgtgaagaacgaccgcgctgaacgcgaacggttg
cacccgtccattgaccatattctggatgagacccaaggcatcatcgtctaccaagaacaa
gtgatgcagatcgcccaggaaatggcgggctacagccttggtggggcggatttgctgcgt
cgtgccatgggtaaaaagatccaagaggcgatggacgcggaaaagccgaaattccttgca
ggctcggctgaaaatggcgtcgatgaaaagaaggcgaaagaggtctgggacctgctggat
aagttcgccaactacggtttcaacaaatcccacgcggcggcctatgcggtggtgagctat
caaaccgcatggctcaaggcgaaccacccggtcgagtttatggccggggtgatgaactgc
gatatccacctgacggacaagctggcggtgtactttgaagaggtcaaaaagggccttgat
ctgccctatgtgccaccctgtgtgaaccgctcgcaagccacgtttaacgtgcatgagggc
gcattggtctacggcctcggggcactgaaaaacgtgggcgtggatgccatgggtttggtt
gttgcagggcgcggggataagccgttcgtcacgctttttgactttgcgcgccgtgtagat
ctgaaacgagtgggcaagcgcccgatggagatgctggcccgcgctggtgcctttgatgtg
ttggatgcgaaccgccgccgtgtgttcgacagtctggacggattggtcaactattccagt
gcgatacacgaccaacgtaactcaaaccaagtctcgcttttcggggaagccggtgatgat
ttgcccgagccgcgactgtcccctgtcagtgattggttgcctgcggaacggttggccgag
gaattcaaagccatcgggtttttcctgtctggtcacccgctggacgattattctgccccg
ctcaaacgcaagggcatcgtgaccttggatgaggttacggaaaaagcgcgctctggcgcc
tgcattgccaaaatggcgggatatgtggccgggcgtcaggaacgcaaatcagcccgcggc
aaccgttttgcctttgtgcaactcagcgataccacgggcggttttgaagtgacgatgttc
agtgacactttggaagtggcgcgcgatcatttggacaccggcagcaaggtggtgctaacg
gttgaggcgacgatggaaagcgaccagctcaagttgttggcccggtccgtgacgccgatt
gataccatggtggcggatgcaggcagcacgggcttgcgggtgtatgtcgaggaccaagag
gccattatgcctgtggccggtgtgttgcaaaacgcagccgagacgatcaagcaaggcggc
aaaggcccaatcattttctgtctgctggacgagaaattgccgggcgaggtcgagatgcaa
ctgccgcaggactaccccatgacgccgcagatcaaaggagcgatcaaatcccttgaaggt
gtcgtcatggttgaagacatctaa
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