Algirhabdus cladophorae: ACIRQ6_09100
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Entry
ACIRQ6_09100 CDS
T10905
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acld Algirhabdus cladophorae
Pathway
acld03018
RNA degradation
Brite
Enzymes [BR:
acld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACIRQ6_09100
Messenger RNA biogenesis [BR:
acld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACIRQ6_09100
Ribosome biogenesis [BR:
acld03009
]
Prokaryotic type
rRNA helicases
ACIRQ6_09100
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XKD84245
LinkDB
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Position
complement(1876493..1878532)
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AA seq
679 aa
AA seq
DB search
MKQTLTAALADRGYETLTPVQEAVTDPALEQADLLVSAQTGSGKTVGFGLAIAQTLLGDA
DVFEHAQSPLALVIAPTRELAMQVKRELAWLYAQAKVRLASCVGGMDMREERRALERGAH
IVVATPGRLRDYVARGIIDLSALRAVVLDEADEMLDLGFREDLEFILAACPEDRRTLLFS
ATVPKSIAGLAQKYQRDAQRINTISKAEAHSDITYLAYEVGSRDGENAIINVLRYYEAPT
ALVFANTRAMVNRLTTRLSNRGLSVVSLSGELSQSERTHALQAMRDGRARVCVATDVAAR
GIDLPKLDLVVHAELPSNQETLLHRSGRTGRAGRKGVSCLIVSPQVRKKAQRLLGWAKLT
AEWQVAPSAEAVREKDHARMLADEAWSTEIGEDEAPMVAGLLDQFTPEQIAAAYLRLYQE
RHTAPEELSAINASDTKRPPRENFGPSTWFALTGGRDTGAEPRRLLPMLCKAGGIDKNDL
GAIRVQQDQSYVEIRQSAVDGFVGRVPEGTEVEPGVRITRLAKAPDLGGGGKPSPRPKGS
GGHGKSSYKDKPSYKEKPAYKDKPAYKDKSDYGDKPAYAGKAPAKAKAPYNKGPAADGAK
PAAKKPPFKKKTRPEDTRPEGVVTEKVRKPRHKASGKAGAKAPAGRAPAVGKPNSKKNKA
RRAAAVATQKGGTAPPRRK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagactttaaccgccgcgcttgctgatcgtggatatgaaacgctgacccctgtt
caggaggctgtgacggatcctgcattggagcaggcggatttgctggtctcagcccaaacc
gggtcgggcaagactgttggctttggattggccattgcgcaaactctgttgggcgatgcg
gatgtgtttgaacacgcacaaagcccacttgcccttgtgattgcccccacccgcgagttg
gcgatgcaggtcaaacgtgagctggcttggctttatgcgcaggctaaggtgcggcttgcc
tcctgtgtgggcggaatggacatgcgcgaggaacggcgtgcgctggaacgcggggcccat
attgtagtggcaacaccgggtcgtttgcgcgactacgtcgcccgtgggatcattgatctc
agcgcattgcgcgctgttgtcttggacgaggccgatgagatgctggacctcgggtttcgc
gaggatctggaattcattctagccgcctgtccagaagaccgcagaaccttgctgttttcg
gccacggttccaaaatccatcgcaggccttgcgcaaaaataccagcgcgatgcacagcgg
atcaacacgatctccaaagctgaggcgcattcggatatcacgtatctggcttatgaggtc
ggcagtcgcgatggcgaaaatgcgatcatcaacgtgttgcgttactatgaagcgcctacg
gcccttgtgtttgccaacacgcgcgccatggtcaaccgtctgaccacgcggttgtccaat
cgtgggctgtcggttgtgtccttgtctggcgagctatcgcaatcagagcggacccatgct
ttgcaggcaatgcgggacgggcgtgcgcgggtctgtgtggccacggatgttgctgcccgg
ggcatcgatttgcctaagttggatctggttgtgcatgcggaattgccgtcgaaccaagaa
acgctgttgcaccggtctgggcgtacggggcgggcgggacgcaaaggcgtcagttgtctg
atcgtgtcgccacaggtgcgcaagaaggctcagcgactgttgggttgggcgaaattgacg
gcggaatggcaggtcgcaccctcggcggaagccgtgcgcgagaaagatcatgcgcgcatg
ttggccgatgaggcctggagcactgaaattggcgaagacgaggcgccgatggtggcaggc
cttttggatcaattcacgccggaacaaatcgcagcggcctatttgcggctctatcaagag
cggcacacagcgcccgaagaattgagtgcgataaacgcctctgacaccaaacgcccccca
cgcgagaattttggcccaagcacgtggtttgcgctgaccggtgggcgcgacaccggggcc
gaaccgcgtcgccttttgccgatgttgtgtaaggctggtggcatcgacaaaaacgacctg
ggggccattcgggtgcagcaggatcaatcctatgttgaaatccgtcagtctgctgtggat
ggcttcgtcgggcgcgtcccggaagggaccgaagtagagcctggcgtgcgcatcacgcgc
ttggccaaagcgccggatttgggcggcggtggcaaaccctcgccacgtccaaagggcagc
gggggtcacggcaagtccagctacaaagacaagcctagctacaaagaaaagcctgcttac
aaagataaaccggcctacaaagataagtcggactatggggataagccggcttatgctggc
aaagcgccggcaaaagccaaagcgccctataacaaaggtccagccgctgatggcgcaaag
cctgcagcgaaaaagccgccgtttaagaaaaagacgcgtcctgaagacacacgccccgaa
ggtgtcgtgaccgaaaaggtccgtaagccgcgccataaggcgtcgggcaaggctggtgcc
aaagccccagcaggacgtgcgcccgctgtgggtaagccgaactcaaaaaagaacaaagcg
cgtagagcggctgcagtggccacgcaaaagggcggcacagcgccgccccgtcgcaaatag
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