Algirhabdus cladophorae: ACIRQ6_10040
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Entry
ACIRQ6_10040 CDS
T10905
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
acld Algirhabdus cladophorae
Pathway
acld02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACIRQ6_10040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acld02000
]
ACIRQ6_10040
Transporters [BR:
acld02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACIRQ6_10040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XKD80918
LinkDB
All DBs
Position
complement(2089620..2090870)
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AA seq
416 aa
AA seq
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MADVSGPILAADGTPIKKKLRQALFQSRMRAFLLVSPLLAFIIVSFILPILTLLSQGVYD
DRFNSLMPETAQVLREWDGASEPTEAMFATLVAEIVIAKEERTIGRVATRVNRELSGTRS
LFTSTGRRAAKLEAPFKEAMIDTKKKWGDLETWQAMKVASRTLTTGYLANALDFKQEADG
SIVRQDEERRIHVKLFLRTLEISFVVTVACLILGYPVAYLLSTLSTRSSNLLLILVLLPF
WTSLLVRTTAWIAMLQAQGVMNDLFVVFGLATDDDRFSLIYNKTGTLISMTHILLPFMIL
PLYSVMKTIPPQYVRAAKSMGATNATAFWRVYFPQSVPGIGAGALLVFILAIGYYITPAL
VGGQDGQMISNIIDFHMRRSLNWNLAAALGLVLLVFVLFLFWLYDRIVGIDNMKLG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtatctggccccattctggccgctgacggcaccccgattaaaaagaagttg
cgccaagctttgtttcaaagccggatgcgcgcctttttactggtttcgcctctgttggcc
ttcatcattgtcagttttattttgcccattttgaccctgctgtcccaaggcgtttatgat
gatcgctttaacagcttgatgcctgaaactgcgcaggtcttgcgcgaatgggacggcgca
tccgagccaaccgaggcgatgtttgcgacccttgtggccgagattgtgatcgccaaagaa
gaacgcaccatcggccgtgttgccacgcgtgtgaaccgtgaactatccggcacgcgttcg
ctgtttacgtccacggggcgtcgcgcggccaaactggaagcgcccttcaaggaagcgatg
atcgataccaagaaaaaatggggcgatctggaaacatggcaggcgatgaaggttgcatcg
cgcacgctcaccacaggctatttggccaatgcgttggactttaaacaagaggccgacggc
agcatagtgcgccaagacgaagagcgtcgcatccatgtcaagttgttcctacgtaccctc
gagatttccttcgtggtgactgtggcttgcctgatcttaggatacccggtggcctatctg
ctcagtacgctcagcacacggtcctcgaacttgttgctgatccttgtgttgttgccgttt
tggacatcgctattggtgcggacaaccgcttggattgccatgttgcaggcccaaggggtg
atgaacgatctctttgtggtgtttggattggcgacggatgatgaccggttcagtctgatc
tacaataaaaccggcacactgatttcaatgacgcatatcctgctgccgtttatgatcttg
ccgctctattccgtgatgaaaactattccgccgcaatatgtgcgcgcagcgaaatccatg
ggggccactaatgcaacggccttttggcgcgtctatttcccgcaatcagttccaggcatc
ggggcaggggcgctgttggtctttattctggcgattggctattacatcacaccggccttg
gttggtggccaagatggtcagatgatctcgaacatcattgatttccacatgcgcagatcc
ctgaattggaaccttgcagcggcccttggattggtcttgctggtctttgtgctgttcctt
ttctggctctacgatcgcatcgtgggcatcgacaatatgaagctaggatag
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