Algirhabdus cladophorae: ACIRQ6_11400
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Entry
ACIRQ6_11400 CDS
T10905
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
acld Algirhabdus cladophorae
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acld03021
]
ACIRQ6_11400 (rpoH)
Transcription machinery [BR:
acld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACIRQ6_11400 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
UCR_14kD
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
XKD81178
LinkDB
All DBs
Position
complement(2390486..2391382)
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AA seq
298 aa
AA seq
DB search
MANYANLPAPTPEGGLNRYLQEIRKFPMLEPQEEFMLAKAWVEEQDTSAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPDKGFRLATYAMWWIRASIQEYVLRS
WSMVKLGTTSAQKKLFFNLRKAKAKIGALEEGDLRPENVALIAQQLNVTEDEVVSMNRRM
SGGDASLNAQVGSEGEGTMQWQDWLEDEDADQATDYAEQDELDTRREMLAAAMDVLNDRE
KDILTQRRLADKPVTLEDLSGQYDVSRERIRQIEVRAFEKLQARMVELASEKGLLPAA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggctaattatgcaaatctaccggcacccacaccagagggcggcctgaaccgctatttg
caggaaatccgcaagttcccgatgctggaaccacaagaagaatttatgttggccaaagca
tgggttgaggaacaagatacctcggcggcccacaaaatggtgacatcacacctgcgcttg
gccgctaagattgccatgggctatcgcggctatggcctgcctcaggccgaagtgatctcg
gaagcaaacgttggccttatgcaggcagtcaaacgttttgaccccgacaaaggcttccgc
ttggcgacttatgcaatgtggtggatccgcgccagcattcaggaatatgtgctgcgcagt
tggtccatggtcaaattgggcacgacctctgcgcaaaagaagttgttcttcaacctgcgc
aaggcaaaggccaaaatcggcgccttggaagagggggatctgcgtcccgaaaacgtggcc
ctaattgcccagcagctgaacgtgaccgaagacgaagtggtgtcgatgaaccggcgcatg
tccggtggcgatgcctctttgaatgcgcaagtgggctccgaaggcgaaggtacaatgcaa
tggcaggattggctggaagatgaagatgccgatcaagccacagattatgccgaacaagac
gagttggacacacgtcgcgaaatgttggcggccgctatggacgtgttgaatgatcgtgaa
aaagatatcctgacccagcgccggttggccgataaacccgtgaccctcgaggatctcagc
ggccaatatgacgtcagccgcgagcggatccgtcaaatcgaagtgcgtgcctttgaaaaa
ttgcaggcgcggatggttgaactggcatctgaaaagggccttttgcccgcagcgtaa
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