Algirhabdus cladophorae: ACIRQ6_12935
Help
Entry
ACIRQ6_12935 CDS
T10905
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
acld Algirhabdus cladophorae
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acld03016
]
ACIRQ6_12935 (miaB)
Enzymes [BR:
acld01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ACIRQ6_12935 (miaB)
Transfer RNA biogenesis [BR:
acld03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ACIRQ6_12935 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
XKD81473
LinkDB
All DBs
Position
complement(2686846..2688153)
Genome browser
AA seq
435 aa
AA seq
DB search
MSDPKKLYIKTYGCQMNVYDSERMVEALGGQGYVETKSPDEADMILLNTCHIREKAAEKV
YSELGRFKGLKAEKPDLKIGVAGCVAQAEGAEIIKRQPMVDLVVGPQSYHRLPQMEEVVQ
TGAKALDTDFPEEDKFEHLKARPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPS
DRILAEAQDLVERGVREITLLGQNVNAYHGHDGGLAGLIWALAEIDGLDRIRFTTSHPND
MDDALIEAHGTCEKLMPYLHLPVQSGSDAILKAMNRKHTRDDYFRLMDKIKGARPDLLLS
GDFIVGFPGETDADFEDTLDLVRQVGYGQAYSFKYSARPGTPAAERATVEAHVADARLQE
LQALLTQQQRATQDSMVGRQVKILFEKTGRDPGQLIGKSEYLHAVYANADPANLGQIKSA
RIVRSMTNSLEAVLD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccccaagaagctatatatcaaaacatatggctgccagatgaatgtctacgat
agcgagcgtatggtcgaggcgctgggtgggcagggctatgtcgaaaccaaatcgcctgat
gaggcggacatgattttgctgaacacgtgccatatccgcgaaaaagccgcggaaaaggtt
tattcggaactggggcggttcaaggggctgaaggccgaaaagcctgatctaaaaatcggt
gttgcgggctgtgtggcccaagccgaaggggctgaaatcatcaaacgccagcctatggtc
gatctggttgtgggcccgcaaagctatcaccgcctgccccaaatggaagaggttgtgcaa
accggcgccaaagcgttggacactgatttccccgaagaagacaagtttgaacacctcaaa
gcccgccccaaggcaaaacggggaccgaccgcgtttttgaccgtgcaagaaggatgcgac
aagttttgcgccttttgcgtggtgccatatacgcgtggggccgaggtcagccgcccctcg
gaccgtattctggccgaggcgcaggatttggtcgaacggggcgtgcgggaaatcactctc
ttgggccaaaacgtgaatgcctatcacggccatgacggcggtctggcgggtctgatctgg
gctttggccgaaatcgacggtctggatcgcatccgctttaccacgtcccatcccaacgac
atggatgacgccttgatcgaggcccatggcacctgcgaaaaactgatgccttaccttcac
ctgcctgtgcagtcggggtccgatgcgatcctcaaggcgatgaaccgcaaacatacccga
gatgactatttccgattgatggacaaaatcaaaggtgcgcgccctgatttgttgttgtcc
ggcgactttatcgtaggctttccgggcgaaactgatgcggattttgaagacacattggat
ctggtgcggcaagtaggctacgggcaggcctattcgttcaaatattccgcccgcccgggc
acaccggcggcagaacgcgcgactgtcgaggcccatgtggccgatgcgcgcttgcaagaa
cttcaagccttattgacccagcagcaacgtgccacccaagacagcatggtggggcgacag
gtcaagatcctgttcgaaaagacgggtcgggatccggggcagctcatcggcaagtccgag
tacttgcatgcagtctacgccaacgcagatcccgccaacctaggccaaatcaaaagcgct
aggattgtgcgcagcatgaccaattccctcgaggcggttcttgattaa
DBGET
integrated database retrieval system
