Algirhabdus cladophorae: ACIRQ6_13220
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Entry
ACIRQ6_13220 CDS
T10905
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acld Algirhabdus cladophorae
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acld03032
]
ACIRQ6_13220 (topA)
03400 DNA repair and recombination proteins [BR:
acld03400
]
ACIRQ6_13220 (topA)
Enzymes [BR:
acld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACIRQ6_13220 (topA)
DNA replication proteins [BR:
acld03032
]
Prokaryotic type
DNA Topoisomerases
ACIRQ6_13220 (topA)
DNA repair and recombination proteins [BR:
acld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACIRQ6_13220 (topA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
CARME
Motif
Other DBs
NCBI-ProteinID:
XKD81530
LinkDB
All DBs
Position
2739840..2742470
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AA seq
876 aa
AA seq
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MPVVVVESPAKAKTINKYLGNDYTVLASYGHVRDLPPKDGSVDTENDFEMLWEIASDSKK
HVKAITDALKDDPELILATDPDREGEAISWHLQEALTKRKAIKKDTPVSRVVFNAITKTA
VTEAMKNPRQVDMELVEAYLARRALDYLVGFKLSPVLWRKLPGSRSAGRVQSVCLRLIVE
REMEIEVFNAQEYWSVKTMLASPRGQEFEARLTVLGGKKLDKFDIGNETAAELAVQAINS
RDVTVKSVEAKPANRNPSAPFMTSTLQQEASRKFGMGARQTMSLAQRLYEAGLITYMRTD
GIDMAPEAVHAARDAIKSKYGGEYVPDSPRMYKNKAKNAQEAHECIRPTELDKDTAAAKI
VDADQRKLYDLIYKRTIASQMAAARMERTTADIASADGQVELRATGQVMLFDGFLKVYEE
GRDDAVVDDDDKRLPQLSEGEAINKKSVTPEQHFTQPPPRYTEATLVKRMEELGIGRPST
YASIVTTIQDRDYVRKEKNRLYPEDKGRLVIAFLSNYFRRYVGYDFTADLESQLDDVSAG
EREYKDVLDRFWRDFSAAIAETADLRITEVLDKINEVLEPHLFPPNAEGTDPRLCPNCGA
GRLSMRTARSGGAFIGCSNYPECRYTRAFGPPGQEDTGGIPPEGKLLGQDAGDNIYVFKG
RFGPYAQRGEVTEENKKPPRQSIPKEWPPADVELETALKLLSLPRQIGPHPEDGVMVWSN
IGRYGPYIKHAESTSDRGGTNANLESLDEVFTVGMNRAVQLLAEKVASRGGRGAPAKTLR
ALDDHPDGGPINIMDGKYGPYIKWEKVNATIPKGTEPDDVTQEMALELIAAKAPKKRKAA
AKKKPAAKKKAPAKKATAKKPEAKKAAPKDDGDVVE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgttgttgttgaatccccggccaaagccaagaccatcaacaaatatttaggc
aatgattacaccgtactagcctcttatggccatgttcgcgacttgcctccgaaagacggc
tcggtcgacacggaaaacgactttgagatgctgtgggagatcgcgtcagacagcaaaaaa
cacgtcaaagcgatcacagatgcgttgaaagacgaccccgaactgatcctcgcaactgac
cctgatcgcgaaggcgaagcgatctcgtggcacttgcaagaggcgctgacaaaacgcaaa
gccattaagaaagacacccccgtcagccgcgtggtgttcaacgcaatcacgaaaacggcc
gtgaccgaggctatgaaaaatccgcgacaagtggatatggaactggtcgaggcctatttg
gcccgtcgcgcgttggattatttggtggggttcaagctgtcgccagtgttgtggcgcaag
ctgcccggctcgcgttccgcggggcgcgtccaatccgtttgtctgcgtctgatcgttgaa
cgcgagatggagatcgaggttttcaacgcgcaagaatactggagtgtgaaaaccatgctc
gcctccccgcggggacaggaattcgaagcgcgtctgaccgtcttgggcggcaaaaagctg
gacaagtttgacatcggtaatgagacggccgctgaactagcggtccaagcgatcaattca
cgcgatgtgacggtgaaatccgttgaggccaaaccggccaaccgcaacccgtccgcaccg
tttatgacgtccactttacagcaagaagccagccgcaagttcggcatgggcgcacgtcag
accatgagccttgcccagcgtttgtatgaagcaggtctgatcacctatatgcggaccgac
gggattgatatggcccccgaggccgtgcacgcagcccgcgatgcgatcaagtcgaaatat
ggcggtgaatatgtccctgacagcccgcgcatgtacaaaaacaaggctaaaaacgcccaa
gaggcacacgaatgtatccgtccgaccgaattggacaaagacacagccgccgccaagatt
gtggatgcggatcagcgcaagctttatgacctgatctataaacggaccatcgccagtcaa
atggcggcggctcggatggaacggactacagcggatattgctagtgcagatggccaagtt
gaattgcgggccacggggcaggtcatgctctttgacgggttcctcaaggtctatgaagaa
ggccgcgatgatgcagtggtggatgatgatgacaagcgtttgcctcagctcagcgaaggc
gaagcaatcaacaagaaatctgtgacaccagagcagcattttacccagccgccgccccgc
tacaccgaagctactttggttaaacggatggaagaactgggcatcgggcgtccatccacc
tatgccagtatcgtgacaaccattcaggatcgcgactacgtacgcaaagaaaagaaccgc
ctctatcccgaggacaagggccgtttggtcattgccttcctcagcaattatttccgccga
tacgtgggctatgattttaccgcagatctggaaagccagctggatgatgtcagtgccggt
gagcgggaatacaaagacgtgctggatcgcttctggcgcgatttctcggcggcgattgcc
gaaactgcagatctgcggatcaccgaagtgctggacaagattaacgaggtgctagaaccc
catttgttcccacccaatgccgaaggcacggacccgcgcctttgtccaaattgcggtgcc
ggacggcttagcatgcgcacagcgcgttcgggtggtgcgttcattggctgttcgaactat
ccagaatgtcgctacacccgcgcctttggcccccccggccaagaggatacaggcggcatc
ccgccagagggcaagttgctgggccaagacgctggtgacaatatctatgtgttcaaaggt
cgctttggtccctatgcccagcgcggcgaggtgactgaggaaaacaaaaaaccgccacgc
cagtccatccctaaagaatggccacctgcggatgtggaattggaaacggcgctcaaattg
ctttctctgccccgccaaatcggtcctcaccccgaagatggcgtgatggtctggtcaaat
atcgggcgctatggcccctacatcaaacacgccgaaagcacatcggaccgtggcggaacc
aatgccaatctcgaaagcctcgatgaggttttcactgtcggtatgaaccgtgccgtgcaa
ttgctggccgaaaaagtcgccagtcgcggcgggcgcggtgcaccggcaaaaaccctgcgc
gccttggatgatcaccccgatggcggtccgatcaacatcatggatggcaaatacgggccc
tacatcaaatgggaaaaggtcaatgcgaccatccccaagggcaccgagccggatgatgta
acccaagaaatggcgctggaattgattgctgccaaggcgcccaagaaacgcaaagccgcc
gccaagaaaaaacctgcggcaaagaaaaaagcacctgccaagaaggccaccgccaagaaa
cctgaggccaaaaaggcagcaccaaaggatgacggggacgtggttgaatag
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