Algirhabdus cladophorae: ACIRQ6_16340
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Entry
ACIRQ6_16340 CDS
T10905
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acld Algirhabdus cladophorae
Pathway
acld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIRQ6_16340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acld03019
]
ACIRQ6_16340 (recQ)
03400 DNA repair and recombination proteins [BR:
acld03400
]
ACIRQ6_16340 (recQ)
Enzymes [BR:
acld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACIRQ6_16340 (recQ)
Messenger RNA biogenesis [BR:
acld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACIRQ6_16340 (recQ)
DNA repair and recombination proteins [BR:
acld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACIRQ6_16340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
XKD82126
LinkDB
All DBs
Position
complement(3366985..3369024)
Genome browser
AA seq
679 aa
AA seq
DB search
MSTPSDLLADVFGFDAFRPGQGEIVEAVVAGQNTLAIMPTGGGKSLCFQLPALCREGVTL
VISPLIALMRDQVRALQEAGVCAGALTSGNTDEETDAVWQALEEKRLKLLYMAPERLASS
GARAMLTRIGVSLIAVDEAHCVSQWGHDFRPDYLAIGALRRSLNVPLAAFTATADAETRD
EIVERLFDGEAPTTFLHGFDRPNLHLTFEAKNNPRTQILNFAAARKGRSGIVYCASRAKT
ESLAKALRDVGHTACHYHGGMEADDRRTVERRFQQEDGIIVVATIAFGMGVDKPDVRWVA
HADLPKSIEAYYQEIGRAGRDGAPADTLTLFGADDIRLRRAQIDEGLAPPERRLADDGRL
NTLLGLAEALECRRKNLLGYFGETDVTCGNCDLCEKPPETFDGTTPVRMALSAILRTEEW
FGSGHLIDILLGHSTDKIKARGHSNLPTFGIGTAYDKRQWQTIFRQMMGHDLVRPNPDRH
GALQMTHAARPILRNEATITLRKDSLKKTKSGPVVRSLVSDEDAPLLSALKAKRRALAET
ARVPAYIIFNDRTLIEMAETRPKTMDEMAGIGGVGAKKLERYGVEFLTVIAGEVEAQHPK
RRQLAGQNAGEVYDELLQVQADLSRGTMGTDKPMSCSASLLAKVASSRASDTAAIERILG
DKRAERFGEAFLDVLRQNQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccaagcgaccttttggccgatgtctttggattcgacgcctttcgtcccgga
cagggcgagattgtcgaggccgttgtcgcgggtcaaaataccctagccattatgccaaca
ggcggcggaaaatccttatgttttcagctgcctgcgctgtgtcgcgagggtgtgactctg
gtcatttcccctttgattgcgctgatgcgtgatcaggtgcgcgcccttcaggaggccggc
gtgtgtgcaggtgctttgacatcaggcaataccgacgaagaaaccgatgcagtatggcag
gccttggaagaaaaacggctcaagctgctgtatatggcccccgaacgtcttgccagttct
ggtgctagggcaatgctcacgcgaataggggtcagcttgatcgctgtggatgaggcgcac
tgtgtcagtcaatggggtcatgacttccgacccgattatctggcaattggtgctctgcgc
cgaagcctgaacgtgcctttggcagcctttaccgcaacagccgatgcagaaacgcgcgat
gaaattgtcgaacgcttgtttgatggcgaggccccgaccacgtttctacatggctttgac
cggcccaacctgcatttgacgtttgaggcgaaaaacaacccccgcacccagatcctgaac
ttcgctgcagcgcgcaaaggccgatccggcatcgtctattgcgcctcccgcgcaaaaacc
gaaagcctggccaaggcccttcgcgacgtgggccatacggcctgccactatcacggcggt
atggaggcggacgaccgtcgcacagtagaacgccggtttcagcaagaagacggtataatc
gtcgtggcaacaatcgcctttggtatgggtgttgataaacccgatgtgcgctgggtcgcc
catgcggatttgcctaaatccatagaggcttactatcaggagatcgggcgcgctggccgc
gatggggcaccagccgatacactgaccctttttggtgctgacgatattcgcctgcgccgc
gcccaaattgatgagggtctggcgcccccagaacgtagattggccgatgatggcaggctg
aacactttgcttggtctggccgaagctttggaatgccgtcgcaagaacctactgggatat
ttcggcgaaacagacgtcacttgcggtaattgtgatctttgcgaaaaaccgcccgagacc
tttgatggcacgacacccgttcgcatggccctatcggctattttgcggaccgaagaatgg
tttggcagcgggcatctgattgatattttgcttggacacagcacagacaaaataaaagct
cgcggtcatagcaacttacccacttttgggatcggaacggcttatgacaaacgtcaatgg
caaacgattttccgccagatgatgggtcacgatctggtgcgaccgaaccctgacaggcat
ggtgcattgcaaatgacccatgccgcgcggccgatattgcgcaacgaagccacgataacc
ctgcgcaaggacagcctgaaaaagaccaagtcgggcccagtcgttcgcagccttgtatct
gacgaagacgcgccgctgctttccgcgctcaaggccaaacggcgcgctctggccgaaact
gcccgcgtgcccgcctacatcattttcaacgaccgcactttgatcgagatggccgagacc
cggccaaaaactatggacgaaatggcgggtattgggggcgtcggcgcaaaaaaactggaa
cgatacggcgtcgaattcctgactgtgatcgctggcgaagttgaggcccagcatcccaag
cggcgccagctggcagggcaaaacgcgggcgaggtatacgatgaattgttgcaagttcaa
gcagacctcagccggggcacaatgggcaccgacaaaccgatgagttgctctgcctccttg
ctggccaaagttgcgtcctctagggcaagcgatacggccgcgattgaacggatcttgggc
gacaaacgcgcggaacgttttggcgaggcgtttttggacgtgctgcgccaaaaccaataa
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