Algirhabdus cladophorae: ACIRQ6_17045
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Entry
ACIRQ6_17045 CDS
T10905
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acld Algirhabdus cladophorae
Brite
KEGG Orthology (KO) [BR:
acld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acld03009
]
ACIRQ6_17045
Enzymes [BR:
acld01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACIRQ6_17045
Ribosome biogenesis [BR:
acld03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACIRQ6_17045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
Methyltransf_25
PSD5
TRM5-TYW2_MTfase
Methyltransf_31
Ral
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
XKD82259
LinkDB
All DBs
Position
3510578..3511783
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AA seq
401 aa
AA seq
DB search
MTVTKIQRLNAQALGVDENGQHAAYVLPQENVEITEGVARIVEPSASRVKAPCSHFKKCG
GCSLQHASDDFVAEWKVDAVVQALATQGVEVAQRPEIYTSPPASRRRAKLTAKRTKSGAM
VGFMSARSHTLLSIPNCRVLCPEIMSGLPMLEALTVMGASRKAQVSLSVTSSAAGLDVDV
SGGKPLTDPFRLEVTQFAQRYGLARISWDGELIVTLAPPTQSFGSLTVQPPVGAFLQATQ
DGEQALAQTVAEAVGQSKSVIDLFAGCGTFAARLVSKAKVHAVEGSQDMLAALDAGWRKA
QNVKHLSTEVRDLFRRPLDADELKPYDAIVLDPPRAGAAAQVVHIARAQSPLVVMVSCNP
SSFARDAKVLVDGGYRLDRLTVVDQFRWSSHIEAVGVFRRV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcactaaaattcaaagattgaacgcccaggcgctgggcgtggacgaaaatggt
cagcatgcggcctacgtccttccgcaggaaaatgttgagatcactgagggtgtggcgcgg
atcgttgaaccatctgcatcccgtgtcaaagcaccgtgctcgcattttaagaaatgtggt
ggatgcagtttgcaacatgccagcgatgattttgtggcggaatggaaagttgatgcggtc
gtgcaggccctcgcgacacagggtgttgaagttgcgcaaaggccggaaatctatacatcg
ccgccggcgtcacggcgtcgggcaaaactaacggcaaagcgcaccaaaagcggcgcgatg
gttgggtttatgtccgcgcgcagtcatacgctcttgagcattccaaactgtagggtgctc
tgtcccgagattatgtctgggttgccgatgcttgaagcgctgacagttatgggcgccagt
cgcaaggcgcaggtgtcgttgtcggtcaccagttcagctgcgggtttggatgttgatgta
agcggcggcaagccactgacggatccgtttcgattagaggtcacgcaatttgcacagcgc
tacggtcttgcccgtatcagttgggatggtgaattgatcgtcacacttgcccctcccacg
caaagctttggatcccttacggtgcagcccccggttggggcctttttgcaagccacgcaa
gacggagaacaggccttggcccaaactgttgccgaggccgttgggcaatccaagtcggtg
atagaccttttcgcagggtgcggaacctttgctgcacgattggtttcgaaggccaaggtc
catgcggttgaaggcagccaagacatgctggccgccttggatgccggttggcgcaaggcc
caaaacgtcaaacatttatccactgaagtgcgcgatctctttcgcaggcctttggatgca
gatgaattgaaaccctatgatgcgattgtccttgatcctccacgcgccggtgcagcggct
caggtggtccatatcgcgcgagcccaaagccccttggtggttatggtatcttgcaatccc
agcagctttgctcgcgatgcgaaggtcttggtcgatggcggatacaggttggatcggcta
actgtggttgatcaattccgctggtccagccacatcgaagctgtgggcgtgtttcggcgg
gtctag
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