Acinetobacter sp. LF10: ACN19N_04570
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Entry
ACN19N_04570 CDS
T11555
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aclf Acinetobacter sp. LF10
Brite
KEGG Orthology (KO) [BR:
aclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aclf03021
]
ACN19N_04570 (rapA)
Transcription machinery [BR:
aclf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACN19N_04570 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_22
AAA_34
Motif
Other DBs
NCBI-ProteinID:
XQC28637
LinkDB
All DBs
Position
950023..952851
Genome browser
AA seq
942 aa
AA seq
DB search
MQPFAIGQRWLSDTETELGLGVLIDVDERSISILFPKSDETRVYARNNAPLSRIIFNVKD
EVQDQEGVKWIVESVEDRHGVLRYDVVRSLENGEQERKSLNETRIGAQIQLSKPLERLLA
SQIDYKEWYDLRIEAMLLQAQMHTSPLRGFLGARVGLIPHQLYIAHEVGKRFAPRVLLAD
EVGLGKTIEAGLIIHQQLKTGRSERILILVPDSLQYQWMIEMRRRFNLQFSLFDLTRTAS
IKEHDPDLNPFLTEQCIIASVDLMVDHDDLREQAVEAGFDLLVVDEAHHLMWSEEDGGND
RYDLVEELAEQTAGVLLLTATPEQLGVESHFARLRLLDPQRFSSLDRFLDEEEQYQQTAK
VAEVLMSDEALTEEHLAALDSLLGHRIDDQPEQRMRAIHELLDRHGTGRILFRNTREAIQ
GFPGRDCQPAPLPAPEDWSFDGKMREQMWPEEGQLDGAWMENDPRVPWLMEVLRKDLKHK
KVLLIARSGPVVEALENVLRLHAGIRTAMFHEGMSLLERDQAAAYFAEDSYGAQILLCSE
IGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLIGTAQERMFRW
YNEALNIFSSISPTAQTLQENFIIELKDCLLADQGQTFEDLLEEVNVQRQALEAELQAGR
DRLLEYNSCRPIVAQGIVQALEDYDDNTTLPMFVKRFMSSTNIDFDEQSNGTVIIKPTDQ
MQVQGITLDEEGMTATFYRDQAQIREDAQYLTLEHPFIESVMEMIRTQSFGSTNVALLKS
NALKQGSVLLEVWFKVDVVAPKGLNLPSSLPKQLIRVLLSETGQDLSAKIDPSILRPYLH
HLDGNSCRQVVKARRDVIEQRYAQALDIAKTSLPELMQQAKEHYGSKWQYEIDRLTYLKQ
FNPSIRQDEIERLQKFQKEGLGLLDGLSVTPEAIQVLVVVKP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
ttgcagccgtttgctattggtcaacgttggttatcggatacagaaactgaactcggtcta
ggtgttcttattgatgtagatgaacgttctatcagtattttattcccgaaaagtgatgaa
acgcgtgtttatgcacgtaacaacgcgcctttgtctcgtatcatcttcaatgtcaaagat
gaagtgcaagatcaagaaggtgttaagtggattgttgaatcggttgaagatcgtcatggc
gtgctgcgttatgatgtggttcgtagcctagaaaatggcgaacaagaacgtaagtcattg
aacgaaacccgtatcggtgcacaaattcagctatcaaaacctttagagcgtttgttagcg
agccaaattgattataaagaatggtatgaccttcgtattgaagcgatgctattgcaagcg
caaatgcataccagtcctttacgtggcttccttggcgcgcgtgtgggtttgattccacat
caactgtatatcgcacacgaagtgggtaaacgttttgcaccacgcgtattgttagccgat
gaagtcggtttgggtaaaaccattgaagcgggtttgattatccatcaacaactgaaaaca
ggacgttcagagcgtatcctaattttagtgcctgattcattacagtatcagtggatgatt
gaaatgcgccgccgtttcaatttacaattttctctattcgatttaacgcgtactgcttcg
atcaaagaacatgatcctgatcttaacccattcctgactgagcaatgcattattgccagt
gtcgatttgatggttgaccatgatgatttgcgtgagcaagcggttgaggcaggttttgat
ttactggttgtcgatgaagcacatcatttgatgtggagtgaagaagacggcggtaatgat
cgttatgatcttgtcgaagagttggctgaacaaacagcgggtgtcttacttctcactgca
acgcctgaacaattaggtgtagaaagccattttgcacgtttacgtttacttgatccgcaa
cgttttagtagcttagatcgtttccttgacgaagaagaacaatatcagcaaacagctaaa
gttgccgaagtcttaatgtcagatgaagcactgactgaagaacatcttgctgctttggat
agtttattgggtcatcgtattgatgatcagcctgaacagcgtatgcgtgcgattcatgaa
ttattagatcgtcatggtacaggtcgtattttattccgtaacacacgtgaagcgattcaa
ggcttcccaggtcgtgattgccagccagcacctttgccagcaccagaagattggtcattt
gatggcaaaatgcgtgagcaaatgtggccagaagaaggtcaacttgatggtgcatggatg
gaaaatgatccgcgtgtgccatggttaatggaagtactacgcaaagatttaaaacacaaa
aaagtgttattgatcgcacgtagtgggccagtggtagaggcattagaaaatgtattgcgt
ttacatgcaggtattcgtactgccatgttccatgaaggtatgagcttattagagcgtgac
caagctgcggcatactttgcagaagacagttatggtgctcaaatcctcctctgttctgag
attggttcggaaggacgtaacttccagtttgccagcgatctcatcctatttgatttgcct
gcaaacccagatgtacttgaacaacgtattggtcgtttggatcgtattggtcaagaaaat
cgtattcaaattcatgtgccttatttaattggtacagcacaagaacgtatgttccgttgg
tacaacgaagcactgaatattttcagtagtatttctccaaccgcacaaacgctgcaagaa
aactttattattgaactcaaagattgtttattggcagatcaaggtcagacgtttgaggat
ttacttgaagaagtgaatgtacaacgtcaagctttagaagctgagttacaagctggtcgt
gatcgtttgcttgagtacaactcttgccgtccaattgtggcacaaggcattgtgcaagca
cttgaggattatgatgacaacacgactttaccaatgttcgtgaagcgtttcatgtcatca
accaatattgattttgatgagcaaagcaacggtacagtgatcatcaaaccaactgatcaa
atgcaagttcaaggaatcaccttggatgaagaaggcatgacagcaaccttctatcgtgat
caggcacaaatccgtgaagatgcacagtacttaactttggaacacccatttattgaaagt
gtgatggaaatgatccgtacacaatcatttgggagtactaacgttgcattactcaaatcg
aatgcgttaaaacaaggttcagttttattggaagtttggtttaaggtcgatgtcgttgca
ccaaaagggttgaacttaccgtcaagtttgccgaagcaattgattcgcgtattactgagt
gaaactggtcaggatttatctgccaagatcgatccaagtattttgcgcccatatttgcat
catctcgatggcaatagctgccgtcaagttgtgaaagcacgccgtgatgtaattgaacag
cgttacgcacaagctttagatattgccaaaacctctttgccagagttgatgcaacaagca
aaagaacattatggcagtaaatggcaatatgaaattgaccgtttaacttatcttaagcaa
tttaacccaagtattcgtcaagatgaaattgagcgtttacaaaagttccagaaagagggg
ctaggcttattagatggtctttctgtgaccccagaagcgattcaagtcttagttgtggtt
aagccttaa
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