Acinetobacter sp. LF10: ACN19N_07380
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Entry
ACN19N_07380 CDS
T11555
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aclf Acinetobacter sp. LF10
Pathway
aclf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aclf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN19N_07380 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aclf03019
]
ACN19N_07380 (rhlB)
Enzymes [BR:
aclf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACN19N_07380 (rhlB)
Messenger RNA biogenesis [BR:
aclf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACN19N_07380 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
FACT-Spt16_Nlob
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XQC29128
LinkDB
All DBs
Position
1532944..1534095
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AA seq
383 aa
AA seq
DB search
MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPLQEQRFRGEPRALILAPTRELALQIESDAQALTKFSNLHLVTLLGGVDFDK
QKKMLDSNFVDIIVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRY
SPFKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYK
LLQEILRDEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacatctggttttgaaaccttaaatttacatccgcagttgaagaaagcaattgatgct
ttgggttttacacaaatgaccccaattcaacaaaaggttttgaaatatacattagcaggg
catgatgccattggtcgagcgcaaactggtacaggtaaaacagcagcctttttgattagt
gtgatcaatgatctattaaataatccgctacaagaacaacgttttcgtggcgaaccacgt
gcgctgattctggctcctacacgtgagttagcactacagatagagagtgacgctcaagct
ttaacaaaattttcaaacttacatcttgtcactctacttggtggtgtggattttgataag
caaaagaaaatgttggatagtaattttgttgatattatcgttgcaacgcctggtcgttta
attgattttgtcgagcaaaaagaagtttggttggataagattgaattccttgtgattgat
gaagccgatcgtttattagatatgggttttattccatcggtaaaacggattgtgcgttac
tcacccttcaaagaacaacgtcaaactttaatgttttctgcaacttttagctatgatgta
cttaatcttgctcgtcagtggctatttgaacctgtaacggttgagattgagcctgagcaa
aaaaccaataatgatgtggagcagcgtgtttatgtggttgcgaaacaagataagtacaaa
ttattgcaagaaattttgcgtgatgaaccaattgataaagttatgattttcgcaaatcgt
cgagatcaggtgcgtcgtttatatgatcatttaaagcgtgatggttataaagttggtatg
ttatctggtgaaatcgctcaagataaacgattgaagatgctcgaccagttcaaacaaggt
aagcataatattatgatcgcaacagacgttgctggtcgtggtattcacgttgacggcgtg
tcacatgtggtgaattttactttgccagagcagtctgatgattatgtacatcgaattggt
cgtacaggtcgtgctggtgctcaaggtgttagtattagtttcttatctgaagatgatgct
ttctatttgccagaaattgaaaaagcgattggtaaaaagttacctttaacgcgtttagat
ggatattgttaa
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