Acinetobacter sp. LF10: ACN19N_09290
Help
Entry
ACN19N_09290 CDS
T11555
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aclf Acinetobacter sp. LF10
Pathway
aclf03030
DNA replication
aclf03430
Mismatch repair
aclf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACN19N_09290 (dnaE)
03430 Mismatch repair
ACN19N_09290 (dnaE)
03440 Homologous recombination
ACN19N_09290 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aclf03032
]
ACN19N_09290 (dnaE)
03400 DNA repair and recombination proteins [BR:
aclf03400
]
ACN19N_09290 (dnaE)
Enzymes [BR:
aclf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACN19N_09290 (dnaE)
DNA replication proteins [BR:
aclf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACN19N_09290 (dnaE)
DNA repair and recombination proteins [BR:
aclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACN19N_09290 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XQC26684
LinkDB
All DBs
Position
1911386..1914949
Genome browser
AA seq
1187 aa
AA seq
DB search
MRFVHLGIHTEFSITESIVRIPDLVKAAVKDDMPALALTDLSNLHAAVKFYEACLKKGIK
PVLGSVIRLNDAEHRATLLAMSSKGWRNLTEIVSRGFIEGQQLSIPCVQKEWILEQSEDL
IVLLGQHSDVGKMLCSSNPQKAEPLLEAWIEKFGNRVYLALTRTERVGEEDFIQQAVKLA
AKYQIGVVAHNDVHFVEQDDFEAHEARVCIADGYVLGDDKRPKNYSSEQYFKTGEQMSEL
FSDIPSAIENTYQIAKRCNVALQLGTYFLPDFPIPDGYTIDTYFEHLSRTGLEERLNHLY
PIAERDEDWAEIRQPYDDRIKYEVDIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIEYVAQNYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGVDLATAIDMEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPGKITDYSAVLCEADGTSRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKRIKSEIPLEIANVPLDDKDAYLVFA
DANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GAAKKEIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPSEFMAAVLSS
EMQNTDSIVFLIDDCRNNKLEVLPPSVNMSLYHFHASDEKTIVYGLGAIKGVGEQAMQSV
IDSRINEGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
DQARTNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFIPAKLNELTPTRRGVTTVFAGLVVDIANFPNRIMITVDDGTARVEISCNHERFQRY
KEIVRLEQVIVIEGEIYEREGFDRPMARLSKAFSLNEIRQKRAQSIQIRLPQDLMTKSLA
KDLQAILLPYCNVDMCQHIALQIQLEQSFATAELHLGPQWKVAPLDELLGKLRDYFGKDA
IFIEYQVKSKAAKVAEAPKVTTVAPPPENMSMDEALDLYQAEISQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgttcatctcggtatccatacagaattttcgattacggaatcgattgttcgc
atacctgatttggtcaaagctgccgttaaagatgacatgcctgcgcttgcattaacagac
ttatccaacttgcacgctgcggtgaaattttatgaagcttgtttaaaaaaaggcattaaa
cctgttttaggcagtgtcattcgactgaatgacgcagagcatcgcgcaaccttattagct
atgagcagtaaagggtggcgaaatctaaccgaaatcgtatctcggggctttattgaagga
caacaacttagtatcccatgcgtacaaaaagaatggatacttgaacaatcagaagattta
attgtattgcttggacagcatagtgatgtcggcaaaatgctttgttcatccaatccacaa
aaagcagaacctttattagaagcatggattgaaaagtttggtaatcgtgtttatttagca
ttaacacgtactgaacgtgttggtgaagaagattttattcaacaagccgttaaactcgct
gctaaatatcaaattggtgtcgttgcacataatgatgttcactttgttgaacaagatgat
tttgaagcacatgaagcacgtgtgtgtattgctgatggttatgtacttggtgacgataaa
cgtcctaagaattatagctctgaacagtattttaaaactggtgagcaaatgtctgaacta
ttttcagacatcccaagtgcaattgaaaatacttaccagatcgcaaaacgttgtaatgtt
gccttacaactcgggacttatttcttacctgatttcccgatcccagatggttataccatc
gacacctatttcgaacatttatctcgtacaggtttagaggaacgcttaaatcacctttat
cctattgctgaacgtgatgaagattgggctgagattcgtcagccctatgatgatcgtatt
aagtacgaagtcgatattattttaaaaatgggctttccaggttacttcctgattgtcatg
gactttattcaatgggcaaaaaataatggcgtacctgtagggccaggacgtggttcgggt
gctggttcattagttgcctacagtttaaaaattactgatcttgatccattacgttatgac
ctacttttcgaacgtttcttaaaccctgaacgtgtctcaatgcccgattttgacgtcgat
ttctgtattgcaggtcgagaccgagtgatcgaatatgttgcacaaaactatggtcgtgaa
gccgtttcacagattgcaacctttggtacgatggctgcaaaaggtgccatccgagacgtt
gcacgagttctaggcaaatcttacggtttggctgaccgcatttctaaaatgattccaact
aagccactgggtgttgatttagcaactgcgattgacatggaaccacagctcaaagacatt
gtgaccaacccatcaaatccagataatgatgatgctgctgaaatttgggaaatggcactt
aagctcgaaggcattacacgaaacacagggaaacatgcaggtggtgtggtcattgcaccc
ggcaaaattaccgattattcagcggtactttgtgaagcagatggaacaagccgtgttgcc
caatacgataaagatgatgtcgaagccgcaggtctggtcaaatttgacttcttggggtta
cgtaacctaacggtgattgaagatgccgttcaaaatattaataaaagaattaaatctgag
attccactcgaaattgccaatgttccgttggatgacaaagatgcctatttagtctttgcg
gatgcgaatacaactgcggtattccagtttgaatccgtcggcatgaaaaaaatgcttaag
gaagcacgaccaagtaaattcgaagaaattattgctttcgtttctttataccgccccggt
ccaatggatctaattccagactttatccatcgtatgcatggtggtgagttcgaatatcta
catccattgctagaaggcgtattggaacctacctatgggattatggtttaccaagaacag
gtgatgcaagcagcacagttctgcgcaggctatacgcttggtggtgcagatttactgcgc
cgcgccatgggtaaaaagaaacctgaagaaatggttaaacagcgccaaatctttattgaa
ggtgctgcaaaaaaagagattgatgaagcaacagcaaaccatatcttcgactatatggaa
aagttcgcaggttatggatttaacaaatcacatgccgcagcctatgcccttgttgcctat
cacactgcatggctaaaagcacattatccatcagaatttatggcagccgttttatcatca
gaaatgcagaatacggacagtatcgtattcttaattgatgactgccgtaataataaatta
gaagtgctaccgccttccgtaaatatgtctttgtatcatttccacgccagtgatgagaaa
accattgtttatggtctcggtgcaattaaaggtgtcggcgaacaagcgatgcagtcggtc
atcgactcacgcatcaatgaaggtccatacaaagatttattcgatttctgtcatcgaatc
gacctgaaaaagatcaataaacgtaccttagaagccttaattcgtgcgggtgcgttggat
tgtttaggcattgaacgttcaagcttaatggctcaattgcctgaagctgttcaagcagcc
gaccaagcacgaactaaccgtgaaacgggtatcatggatttatttggtgaagttgaagaa
gttcaacgcaaacctgctaaacctgtgaaaccgtggtcagacgaagttcgccttaaaggt
gaaaaagatacgcttggattgtatctcactggtcatccgattgatgtctatcgcccagaa
ttaaagtcatttattccagcgaaattaaatgaactcaccccgacacgtcgtggtgtcacg
accgtctttgctggtttagtcgttgatattgccaacttcccgaaccgtatcatgattaca
gtagatgatggcactgctcgtgttgaaatcagctgtaatcatgaacgttttcaacgttat
aaagaaatcgttcgtctagaacaagtaattgttatcgaaggcgaaatttatgagcgtgag
ggttttgatcgcccgatggctcgtttgagtaaagcttttagcctcaatgaaatccgccaa
aaacgtgcccaaagtattcaaattcgtctccctcaagatttaatgaccaaatctttagcc
aaagatttacaggcaattttattaccttattgcaatgtcgatatgtgtcagcatattgct
ttacaaatccaacttgaacaaagctttgcgacagcagaattgcatctaggcccgcaatgg
aaagtcgcacctttagatgaattgctaggcaagctacgtgattattttggtaaggacgcg
atttttattgaatatcaagtgaagtcaaaagctgcaaaagtagcagaagcgcctaaagta
acgacagttgcaccaccacctgaaaacatgtctatggatgaagcgcttgatctatatcaa
gctgaaatctctcaatactcttaa
DBGET
integrated database retrieval system
