Entry |
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Name |
(GenBank) DEAD-box ATP-dependent RNA helicase
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:aclo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLO_0039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:aclo03019]
ACLO_0039
03009 Ribosome biogenesis [BR:aclo03009]
ACLO_0039
Enzymes [BR:aclo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACLO_0039
Messenger RNA biogenesis [BR:aclo03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACLO_0039
Ribosome biogenesis [BR:aclo03009]
Prokaryotic type
rRNA helicases
ACLO_0039
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
39712..41319
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AA seq |
535 aa
MTFNEFNFKEQLQRAIDDAGFKEPSPIQEQAIPFILAGKDIVGQAHTGTGKTAAFGLPIL
NKLKGKSGVEAVVIVPTRELAMQVSDEIYRFGKLLGINTATVYGGQAYARQIKLIENASV
IIATPGRFLDLLRGEKIDIKPDFVILDEADEMLDMGFLDDIKEIFTFLPKERQTLLFSAT
MPTAIKNLAKTILNEPEFVTLTKSDVTNSKITQTFYVVDERERDDALIRLYDYKNPTKSI
IFCRTKKEVDRLSTFMVSQGFMAKGLHGDMEQRQREEAIRAFKTSKLEILIATDVAARGL
DVNDVSHVFNYHLPFDSESYVHRIGRTGRAGKEGVAVSIVTPHEFRMLQKIEKNIGTKLE
AKIVPNIDSVKVKKIAELKQQISEQEIKDYALALVEELKEEFDISTIAFKLASMISASTY
VQGNNNIGKSESDIKRLIENSSRYEGEGSSGRNSRGGGRFGSRGGSRGSDSRGGRSSGDR
NSRGGDRDRAPRGDRPRGDRPRGDRPASDRPRSDRPRTDKPKTDRPSGDRSRKRD |
NT seq |
1608 nt +upstreamnt +downstreamnt
atgacatttaatgaattcaatttcaaagaacaattacaaagagcaattgacgatgcaggt
tttaaagagccaagtcctattcaagaacaagctattccatttatattagcaggtaaagat
attgttggtcaagcacatacaggtacaggtaaaacagcagcatttggacttcctatttta
aataaattaaaaggaaaatcaggcgttgaagctgttgttatagttccaacaagagagctt
gcaatgcaagtttctgatgaaatttatagatttggaaaacttttaggaattaacacagct
acagtttatggtgggcaagcttatgctagacaaattaaattaattgaaaatgctagtgtt
attatagcaactccaggaagattccttgatttattaagaggtgaaaaaattgatataaaa
cctgattttgttattcttgatgaagctgatgaaatgcttgatatgggatttttagatgat
attaaagagatttttactttcttaccaaaagagagacaaactctattattctctgcgact
atgccaacagctattaaaaatcttgcaaaaactattttaaatgagccagagtttgtaact
ttaacaaaaagtgacgtaacaaattcaaaaatcactcaaactttttatgttgttgatgaa
agagaaagagatgatgcactaattagattgtatgactataaaaacccaacaaaatctata
attttctgtagaactaaaaaagaagttgatagattatcaacatttatggtttctcaagga
tttatggcaaaaggtcttcatggtgatatggagcaaagacaaagagaagaggctattaga
gcatttaaaacttcaaaattagagattttaattgcaacagatgttgcagcacgtggactt
gacgtaaatgatgtgtctcatgtatttaattaccatttaccatttgattctgaatcttat
gttcatagaattggaagaacaggacgtgctggtaaagaaggagtagctgtatctattgta
actcctcatgaatttagaatgttacaaaaaattgaaaaaaatataggaactaaattagaa
gctaaaattgttccaaatattgattctgtaaaagttaaaaaaattgcagaattaaaacaa
caaattagtgaacaagagataaaagattatgctttagcattagttgaagagttaaaagaa
gagtttgatatttcaactattgcatttaaattagcttcaatgatttctgcatctacatat
gttcaaggaaacaataatattggtaaatctgaatctgatattaaaagattaattgaaaat
tcatcaagatatgagggtgaaggttcatcaggaagaaattcaagaggtggtggaagattt
ggctcaagaggtggatcaagaggttcagattcaagaggtggtagatcttctggtgataga
aattcaagaggtggtgatagagatagagctccaagaggtgatagaccaagaggtgataga
ccaagaggtgacagacctgcttctgatagaccaagaagtgatagaccaagaacagacaaa
cctaaaactgatagaccatcaggtgatagaagtagaaagagagattaa |