Arcobacter cloacae: ACLO_0991
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Entry
ACLO_0991 CDS
T06845
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aclo
Arcobacter cloacae
Pathway
aclo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aclo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLO_0991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aclo03019
]
ACLO_0991
Messenger RNA biogenesis [BR:
aclo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACLO_0991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KH_KhpA-B
HDOD
KH_NusA_C
KH_PNO1_2nd
Spike_JR1
KH_2
KH_NusA_2nd
Cas3_HD
dUTPase
Motif
Other DBs
NCBI-ProteinID:
QKF89497
LinkDB
All DBs
Position
975755..977299
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AA seq
514 aa
AA seq
DB search
MEYVIVSAIVGILSSAISIFVVKKLDKAKFEVFIEQAKAKAKVIEHEAEVALKDAQLRAK
IECDREFKNARRDYEIMLSKIEKKERELNEHLESELKTIKSEKEQIVEKNRQISALKEGL
ELQKKSYEEKNLEAIKILENASGLTEEEARELMLKKVKEDSRAEISSIFRKKYKIAEQNT
KNEINNMLSHAVTRYAGEFAAERLINNIPLNDEETKGKIIGKEGRNIKALEMLLGVDIII
DDTPNNITVSSFNLYRRAVATKTIQQLLEDGRIQPARIEEIYKKVKFEFDKNIQKEGEDV
VLELGIKSMHPELIKLVGRLRYRASYGQNALAHTLEVSHLAGLLAAQMGGDAILARRAGL
LHDIGKALTHEAPGSHVHLGAEICKRYDECDTVINAIYAHHGHEEPINVESASVCAADAL
SAARPGARREVLESFLKRVEEIENICTSKFGVLNAYAINAGREVRVIVRSELVNDDESVL
LATEIAKEIEEKVQYPGEIKVNVIRELRAESYAR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgtgatagtaagtgctattgtaggaattttaagttctgcaattagtatattt
gttgtaaaaaaattagataaagcaaaatttgaagtttttatagaacaagcaaaagcaaaa
gcaaaagttattgaacatgaagcagaagtagctttgaaagatgcccaattaagagctaaa
atagagtgtgatagggagtttaaaaatgctaggagagactatgaaattatgctttctaaa
attgagaaaaaagagagagagttaaacgaacatttagaatcagagttaaaaacaataaaa
tctgagaaagaacaaatagtagaaaaaaatagacaaatcagtgctttaaaagagggatta
gaactacaaaaaaagagttatgaagagaaaaatttagaagcaataaaaatactagagaat
gcttctggattaactgaagaagaagctagagaattaatgcttaaaaaggtgaaagaggat
tcaagagctgaaatttcttcaatttttagaaaaaaatataaaatagcagaacaaaataca
aaaaatgaaattaataatatgctttcacatgcagttactagatatgcaggtgagtttgca
gctgaaagattgataaataatatacctttaaatgatgaagagacaaaagggaaaattatt
ggtaaagaagggcgtaatataaaagctcttgagatgcttttaggtgttgatattattata
gatgatactccaaataatataactgtttcttcatttaatctttacagacgtgctgttgcc
acaaaaactattcaacaattgcttgaagatggaagaatccaacctgcacgtattgaagag
atttataaaaaagttaaatttgagtttgataaaaatattcaaaaagagggtgaggatgtt
gttttagaattaggtataaaatcaatgcatcctgaacttatcaaacttgttggaagatta
agatatagagcaagttatggtcaaaatgccttagctcatactttagaagtttctcattta
gcaggacttttagcagctcaaatgggtggagatgcaatactagcaagacgtgcagggctt
ttacatgatataggaaaagctttaacacatgaagctccaggaagtcatgttcatttaggt
gctgaaatttgtaaaagatatgatgaatgtgatacagttataaatgcaatttatgctcat
catggacatgaagagccaataaatgttgaaagtgcatctgtttgtgcagctgatgcttta
agtgcagctagaccaggagctagaagagaagtattagaaagtttcctaaaaagagttgaa
gagatagaaaatatctgtacaagtaagtttggtgttttaaatgcttatgcaattaatgca
ggaagagaagtaagagttattgtaaggtctgagcttgtaaatgatgatgaatctgtatta
ttagcaactgaaatagcaaaagagatagaagaaaaagttcaatatcctggtgaaattaaa
gtaaatgttataagagaactaagagcagaaagttacgcaagataa
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