Arcobacter cloacae: ACLO_1380
Help
Entry
ACLO_1380 CDS
T06845
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aclo
Arcobacter cloacae
Pathway
aclo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aclo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLO_1380 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aclo03019
]
ACLO_1380 (pnp)
03016 Transfer RNA biogenesis [BR:
aclo03016
]
ACLO_1380 (pnp)
Enzymes [BR:
aclo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACLO_1380 (pnp)
Messenger RNA biogenesis [BR:
aclo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACLO_1380 (pnp)
Transfer RNA biogenesis [BR:
aclo03016
]
Prokaryotic type
tRNA degradation factors
ACLO_1380 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
MIC19_MIC25
KH_2
Motif
Other DBs
NCBI-ProteinID:
QKF89877
UniProt:
A0A6M8NN69
LinkDB
All DBs
Position
complement(1354792..1356963)
Genome browser
AA seq
723 aa
AA seq
DB search
MSIVCEFDLNGKQEIFEFNKVAKQANGAVLAKIGNAVVLATVVSEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFIKREGKPSDFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
DVDLQTLSLNAANAALYTSNLPIKKSVCGVRVGKIENNYIINPTPEQIASSTLDLYVAGS
KDELLMIEMKTISSSEMVEVDIEAFTKIHNANEMNEDALVEAIAFAQNALKEANLTYEKA
FEEVSKEKVEVELVKFTIEETVINYVRDNFSNEIREAIKKLAKSERATQLKDVAKMISKN
EYCTVNELEFNTIYEAVSIVKREIVRAMIVNDKVRADGRGLKDVRPISIETNILPSTHSS
CLFTRGETQALVIGTIAGPKDGQMYEVLTDKSTSMEKFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLAKKALEATIDDDYNETVRLVSEILESNGSSSMATVCGGSLALKAAGVPISNL
VAGVAMGMVVENDKYSILTDIMGLEDHDGDMDFKVAGTNKGITALQMDIKLGGIELSVLK
EALLQAKEGRDHILDLMEEASKEIVPSGALPLVEQFIIDPSKFMVIIGKAGATIKEIIEK
FTVSIDLDRDNGIVKVSGDNKQNIIDACEHIKTISNNASPRKEIKNIDFEKLYQIDEVVT
GKVERVVDFGAFILLPKGGEGLLHISKISKERVNNVSDILSVGQDIEVKVLKVKKDRIEL
SSN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagtttgtgaatttgatttaaatggaaaacaagaaatttttgaatttaataaa
gttgctaaacaagcaaatggtgctgttttagcaaaaataggaaatgctgtagttttggct
acggttgttagtgaatttgataatcctgttagtgaagattttacacctttaactgtgcaa
tatatagaaaaaacttatgcagctgcaaaattacctggtggatttataaaaagagaagga
aaaccaagtgattttgaaactttaacttcaagagtaattgatagaagtttaagacctctt
tttccaaaaggttatgtttatcctacaactattacagttatggttttaagtgcagataaa
gatgtagatttacaaactttatctttaaatgctgcaaatgctgctttatatacatcaaat
ttacctattaaaaagtctgtttgtggtgtaagagttggaaaaattgaaaacaattatatt
attaatccaacacctgagcaaatagctagttctactttagatttatatgtagctggatct
aaagatgaattgttaatgattgaaatgaaaactatatcttctagtgaaatggttgaagtt
gatattgaagcatttacaaaaattcataatgcaaatgaaatgaatgaagatgctttagta
gaagcaattgcatttgctcaaaacgcattaaaagaggcaaatttaacttatgaaaaagct
tttgaagaagtttcaaaagaaaaagttgaagttgaattagtaaaatttactattgaagaa
acagttataaattatgtaagagacaatttttcaaatgaaataagagaagccataaaaaaa
cttgctaaaagtgaaagagcaactcaattaaaagatgttgctaaaatgatttctaaaaat
gaatattgcacagtaaatgaattggaatttaacactatttatgaagcagtttcaattgtt
aaaagagaaattgtaagagcaatgatagtaaatgataaagtaagagctgatggaaggggt
ttaaaagatgtaagaccaatttctattgaaacaaatattttaccttcgactcactcttct
tgtttatttacaagaggtgaaacacaagctttagttattggtacaatagctggtcctaaa
gatggacaaatgtatgaagttttaacagataaatctacttcaatggaaaagtttatggta
cattataactttccaggtttttcagttggtgaagcaaaacctatgtttggtgtaggaaga
agagaactaggtcatggtaatttggctaaaaaagcacttgaagcaacaatagatgatgat
tacaatgaaactgtaagattagtttctgaaattttagaatcaaatggttcttcttctatg
gcaactgtttgtggaggttctttagcacttaaagcagcaggtgttcctatatctaattta
gttgctggtgttgcaatgggaatggttgttgaaaatgataaatattctatattaactgat
atcatgggattagaagaccacgatggagatatggattttaaagttgccggaactaataaa
ggaattacagcattacaaatggacataaaacttggtggaattgaattatcagttttaaaa
gaagcattacttcaagcaaaagagggtagagaccatatcttagacttaatggaagaagca
tctaaagagatcgtaccaagtggtgctttaccattggttgaacaatttataatagatcca
agtaaatttatggttattataggaaaagcaggagctacaataaaagaaattatagaaaaa
ttcactgtttctattgatcttgatagagataatggaatagttaaagtaagtggagataat
aagcaaaatattattgatgcttgtgaacatataaaaactatatcaaataatgcatcacct
agaaaagagataaaaaatatagattttgaaaaactttatcaaattgatgaagtagttact
ggtaaagtagaaagagttgttgactttggagcatttatacttttaccaaaaggtggtgaa
ggattgttacatatttcaaaaatttctaaagaaagagtaaataatgtatcagatatttta
tctgttggtcaagatatagaagtaaaagttttaaaagttaaaaaagacagaatcgaatta
tcttcaaattaa
DBGET
integrated database retrieval system
