Granulicella tundricola: AciX9_1164
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Entry
AciX9_1164 CDS
T01411
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
acm
Granulicella tundricola
Pathway
acm02020
Two-component system
acm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AciX9_1164
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AciX9_1164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acm03021
]
AciX9_1164
Transcription machinery [BR:
acm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AciX9_1164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
LacI
Arg_repressor
Fe_dep_repress
HTH_23
HTH_38
HTH_IclR
DNA_pol3_delta_C
HTH_Tnp_ISL3
KIF9
HK
BRICHOS
Motif
Other DBs
NCBI-ProteinID:
ADW68227
UniProt:
E8X3N6
LinkDB
All DBs
Position
1364809..1366521
Genome browser
AA seq
570 aa
AA seq
DB search
MYLQPKLNLRVSQRQVLTPGLVQMVSVLALNKLELKDMINSEMVENPVLEELEESAASLD
ERTGIEGDRERSAEAVADEKVREEKDPFDEIDFGSYFQDYLDPGYKTASNFEEFDKPSFE
HFLSQPSTLSDHLLWQLGSLTLKPDVRGAAELIVGNLDMNGYLTASEEELAEALGEALRA
QVLPEPIPFDRHRVKGGVLVEEAVEPGVVQALAAEAVGGREFKAELKAVKTALEVVHALD
PVGVGARDLRECLLLQIDAQKHEAEMMLRRRAKYADRVKLRAEAEDWGEVEVESAAAIDE
RGGDVFGTARHIVAQCLGLLQKKDMRELTKSCGKSPDEVQAAVEFIRTLDPRPGQRYNVS
ETRLIEPDVAFVKRDDVYVVVMNEEDMPTLRLNQGYRKMLKQKQTEKEVKDYVKERYKSA
IQLLRNIEQRKNTIVRTCESIVRRQSEFLEHGESSLKPMMIKEVAEEIGVHPSTVSRAVA
NKYVHTQQGVYELRFFFSEGVNGPEGGDLPLVLLKRKVKKLIEEEDPRKPLTDDHLAAEL
KAQGINVTRRTVAKYREDLQIPSTHQRRVR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
ttgtacctgcaaccgaagctgaatctgagagtgtcgcaacggcaggtgctgacgcctggc
ctggttcagatggtcagtgtgctggcgctgaacaagctcgagctgaaggacatgatcaac
tccgagatggtggagaatccggttctcgaggagcttgaggagtccgcggcgtcgctggat
gagcggacggggattgaaggggatcgggagcgttctgccgaggcggtggccgacgagaag
gttcgtgaggagaaagatcccttcgacgagatcgactttgggagctactttcaggactat
ctggacccgggatacaagacggcttcaaattttgaggagttcgacaagccttcgtttgag
cactttttatcgcagccgagtacgctgagcgatcatttgctgtggcagttggggtctctg
acgctgaagccggatgtgcggggcgcggcggagctgatcgttgggaacctggatatgaac
gggtacctgacggcgagcgaagaggagcttgcggaggcgctgggtgaggcgctgcgggcg
caggtgttgccggagccgattccgttcgatcggcacagggtcaagggtggggttctggtg
gaagaggctgtggagcctggggtggtgcaggctctggctgctgaggcggtcggcggccgg
gagttcaaagctgagctgaaggcggtcaaaacggcgctggaggtggtgcatgcgctcgat
ccggtgggggtgggggcaagggatctgagggagtgtctgctgctgcagatcgacgcacag
aagcatgaggcggagatgatgctgcggcggcgggcgaagtatgcggaccgggtgaagcta
cgggctgaggcggaggattggggtgaggtggaggtcgagagcgcggctgcgatcgacgag
cggggcggggatgtgtttgggacggcgcggcatattgtggcgcagtgcctggggttgctg
cagaagaaggacatgcgggagttgacgaagagctgcggcaagagccccgacgaggtgcag
gcggcggtggagtttatccggacgctggacccgaggccggggcaacggtacaacgtcagt
gagacgaggctgattgagccggatgtggcgtttgtgaagcgcgacgatgtgtacgtggtc
gtgatgaacgaggaggatatgccgacgctgcggctgaaccagggctatcggaagatgctg
aagcagaagcagacggaaaaagaggtcaaggactacgtcaaggaacggtacaagagtgcg
attcagttgctgcggaatatcgagcagaggaagaacacgattgtgcggacgtgcgaatcg
attgtgcggcggcagagcgagtttctggagcatggtgagagctcgctgaagccgatgatg
atcaaggaggtggcggaggagattggggtgcatccttctaccgtcagcagggcggtggcg
aacaagtatgtgcatacgcagcagggggtttatgagctgcggttcttcttctccgaaggc
gtgaacggtccggagggtggggatcttccgctggtgctgctgaagcggaaggtgaagaag
ctgattgaggaagaagatccgcggaagccgctgaccgatgatcatctggctgcggagttg
aaggcgcaggggatcaatgtgactcggcggacggtggcgaagtatagggaggatctgcag
attcccagtacgcatcagcggcgggtgcggtga
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