Granulicella tundricola: AciX9_3499
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Entry
AciX9_3499 CDS
T01411
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acm
Granulicella tundricola
Pathway
acm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AciX9_3499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acm03400
]
AciX9_3499
Enzymes [BR:
acm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AciX9_3499
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AciX9_3499
DNA repair and recombination proteins [BR:
acm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AciX9_3499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF2835
Ribosomal_S13
Zn_ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ADW70504
UniProt:
E8X3Z6
LinkDB
All DBs
Position
complement(4002756..4003565)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETVANGVHDRVHGQRIDSVWTSGKPQTFKSPETEIAEVLTGARIDRVRRIGKT
VVADLTRSSGETAQFLVHLGMTGRLLVSHPEVPLPPHTHAVLGLSGGNELRFVDARRFGR
LSVVHEAYGGPGAEPLTINEEDFIALFKGRKLAIKAALLNQSLLHGVGNIYADESLFRAK
IRPRRQAGKLTRDELKRLRTALIEVLRHAIKLGGSSVSDYVDADGVRGFFQLEHKVYGRA
GETCKDCGTALKKIIVGGRTTVYCPTCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaggtcgaaaccgttgcgaacggagtccatgaccgcgtccacggc
cagcggatcgactccgtctggaccagcggcaaacctcagaccttcaagagccctgagacg
gagatcgcagaggtcctgaccggtgcaaggatcgaccgggttcgccggatcggcaagacc
gttgtggccgacctcactcgctcctccggcgagactgcacagtttctggtgcatctgggt
atgacggggcggctgctcgtctcgcacccggaggttccgctgccgccgcacacgcatgcg
gtgctggggctgagcggaggcaatgagcttcggttcgtcgatgcgaggcggtttgggcgg
ctttccgtggtgcatgaggcctatggcggcccgggagccgagccactcaccattaacgaa
gaagacttcattgcgctcttcaaggggcgcaaactcgccatcaaggcggcgctgctcaac
cagtctctgctgcatggggtcggcaacatttatgccgatgaaagcctcttccgcgccaag
atccgcccgcgaaggcaagctgggaagctcactcgcgacgaactcaagcggctccgaact
gccttgatcgaagttttgcgccatgccatcaagctcggcggctcctctgtctcagattat
gtggacgcagacggagtgcgtgggttcttccagctggaacataaggtctatggccgtgcc
ggtgagacatgcaaggactgtggcacggcgctgaagaagatcatcgtaggtggccgcacc
accgtctactgccccacctgccaacactga
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