Granulicella tundricola: AciX9_3927
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Entry
AciX9_3927 CDS
T01411
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acm
Granulicella tundricola
Brite
KEGG Orthology (KO) [BR:
acm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acm03032
]
AciX9_3927
03400 DNA repair and recombination proteins [BR:
acm03400
]
AciX9_3927
Enzymes [BR:
acm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AciX9_3927
DNA replication proteins [BR:
acm03032
]
Prokaryotic type
DNA Topoisomerases
AciX9_3927
DNA repair and recombination proteins [BR:
acm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AciX9_3927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ADW71203
UniProt:
E8X6Q3
LinkDB
All DBs
Position
pACIX902:complement(210809..211954)
Genome browser
AA seq
381 aa
AA seq
DB search
MSTVSRRSKRVAADVGVSDPMASAEAAGLRYVTDAEPGIHRRKTAGGFRYVDAAGKAVRD
AKMLGRIKSLVIPPAWSDVWISARADGHLQATGRDVRGRKQSRYHPHWRTVRDETKYERM
IQFAGALPGIRKRVEHDLALPGLPREKVLATIISLMEATLIRVGNAEYARENKSYGLTTM
RNKHVEVDGSKITFSFQGKSRVHHTIDLQDRRLASIVRRCEELPGYRLFQYVDREGNHHA
IDSADVNEYLHAITGEHFTAKDFRTWAGSVLAAEMLRGFEPFSSESEAKKNVVQAIAAVA
GRLGNTPSVCRKCYVHPAVLESYLGSAISAEGAKRKLERQITEHVRALRTEERTLLELLR
ERAVVESVASSPSAVGHTKSK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggtgagcaggcgttccaagcgggtggctgcagacgtgggggtgagcgatccg
atggcctcggctgaggcggcggggctgcggtacgttacggatgcggagcctgggattcat
cggcggaagactgccgggggtttccggtatgtggacgcggcggggaaggcggttcgtgac
gcgaagatgcttgggcggatcaagtcgttggtgatccctccggcatggagtgacgtgtgg
atctctgcgcgcgcggacggacatctccaggctaccggccgggacgtgaggggacggaag
cagagccgatatcatccgcactggcgcacggtgagggatgagaccaagtatgagcggatg
attcagtttgctggagcgctgccggggattcgcaagcgagtggaacatgatctggcgcta
ccaggactgccgagggagaaggtgctggcgacgatcatcagcctgatggaggcgacgttg
attcgcgtgggcaatgcggaatatgcgcgggagaacaaatcgtacgggttgacgacgatg
cggaacaaacatgtcgaggtggatgggtcaaagatcacgttcagctttcagggcaagagc
cgggtgcatcacacgatcgatcttcaggatcgccggctggcaagcattgtgaggcggtgt
gaggagttgccggggtaccggttgtttcagtatgtcgaccgggaagggaatcatcatgca
atcgattcggctgatgtgaacgagtacctgcacgcgattacgggtgaacactttaccgcg
aaggacttcaggacgtgggcggggtctgtgttggctgcagagatgttgcgggggtttgaa
ccgttcagttcagaatccgaggcgaagaagaatgtcgtgcaggcgattgcggcggtggcg
gggcggctggggaatacgccttcggtctgccggaagtgctatgtgcatccggcggtgcta
gagtcctatctgggtagtgcgatctcggctgagggagcgaagcggaagctggaacggcag
attacagaacatgtccgggcgctgaggacggaggagcggacgctgctggagttgctgcgg
gagcgggctgtggtggagagtgtggcaagcagtccctccgccgtcggacacaccaagagc
aagtaa
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