Acidithiobacillus sp. M4-SHS-6: ACJU26_01440
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Entry
ACJU26_01440 CDS
T11526
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
acms Acidithiobacillus sp. M4-SHS-6
Pathway
acms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACJU26_01440 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acms03400
]
ACJU26_01440 (recC)
Enzymes [BR:
acms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACJU26_01440 (recC)
DNA repair and recombination proteins [BR:
acms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACJU26_01440 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XNZ25848
LinkDB
All DBs
Position
complement(283057..286554)
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AA seq
1165 aa
AA seq
DB search
MTESSASPSLEPGFIVLHGDRLEWLRDAVLQWLREHPLHPLEEEIFLVQSNGIAEWLQWT
LAQQEGICAAVKVMLPGRFLWDSYARVLGRERVSSRSPLDKAALTWRLLRLLPQLLPDPN
FAPLRSHIADSGSVGMERRWQLATQIADLFDQYQVYRSDWLQDWREGQAILRTALGGWSG
IPEEQRWQPRLWQAVQQDLQGQNAARGRAEIHQAFMEAMQKGNAPVKTLPRRVVLFGAAS
LPEQSLSALAALGQSMQVLLAVPNPCRYYWGDIISGRELLRRESRRQPLRQGKDLSLLAP
ENLHSECNALLAQWGRQGRDFLNMLEQWDDTRTRQSQWGIPRIDLFTEDQGETLLRQLQV
LIREQEVIAPEHCTPIAESDHSIVFHVAHGALRELQILHDQLLAALAKGSLQPRDIIVMV
PDISRFAPLVRATFDQYEHDDARYIPYHIVDLQARQESPLLEALDWLLQLPEQRCRQSEI
RDLLHCPALRRRFAVATEDLPLLESWIEGAGWRWGLSAAHREALGMTHCGVQNSGAFALQ
RLNLGYANGHDSHFAGIEAYGEAGGLDAALLGPLNQLLEHLEFWRGHLSIARHPEDWAAA
GRQLLQDFFSAEDTDDAEILQQLDMALQQWLDDCALADFAEALPLSVFRGTWLDMLDLPE
LQRHFLGGGVTFCTLLPMRAVPYPMICLLGMNEEDYPRRHPRPDFDLMALPGMSRPGDRS
RRDDDHYLMLEALLAARQTLYISWTGRDPRNNTPRQPALMISQLRDAIRQAWPEAIPAAP
VQSSEADADPEKNRLLRRITRIHPLQAFSPRYLEDPGKFPTWAREWFPDPELPRFPQILP
EPAKSRRSLRDLQVFFRCPSRAFYQQRLETFFGEEDPGAEDDETFALNGLDRYALLNAVL
ETVTSPEHSEHRAENPAAIPSLTTQKIAAQLRSGDYPFGILGQRQAEALRGTAESMVAVW
QTWMQTWRPDRQRHNLHHANAYLSLEDWLPPLYRNAAHDQAFLACRASRLLDDKQQIQAD
KVAELWLQQLLAADQGMHCSALLLGRDAVIRSSQPIENARDILGEIVRVWAEGLLQPLPV
TLKTAVAALQGAKPQIVYEGSGYSAGEVHSYLGLARDYPDFASLSNQRCGPRQWGFADYA
EALYRPFVTWLETLEISSLEMEAQA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagttccgccagcccctccctggaacccggttttatcgttctccacggcgat
cgtctggagtggctgcgggatgcggtcctccagtggttacgcgagcatcccctgcatcct
ctcgaagaagaaatttttctggttcagagtaatggcattgccgagtggttacagtggacc
ctggcgcaacaagagggcatctgcgccgccgtcaaggtcatgctgccgggacgcttcctc
tgggacagctatgcccgggtactgggtcgggagcgggtcagcagccgctcccccctggac
aaagccgctttgacctggcgtttgttgcgcctccttccacaactattgccagacccgaac
tttgctcccctgcgctcccatattgccgactctggcagtgtcggcatggagcgccgctgg
cagctagccacacaaattgccgatttgttcgatcaatatcaggtgtatcgcagcgactgg
ctgcaggattggcgcgaaggtcaggccatcctgcgcacggcactgggaggctggtccggc
ataccggaggagcaacgctggcaaccccgactctggcaggccgtacagcaggacctgcag
ggacagaacgccgccaggggacgggcagaaatccaccaggccttcatggaggccatgcaa
aaaggcaatgccccggtcaaaaccttgccgcgccgcgtcgtgctctttggtgccgccagc
ctgcccgaacaaagtctgagcgccttggccgccctgggccaaagcatgcaggtcctgctt
gccgtgcccaacccctgtcgttattactggggagatatcatctccggccgggaactgctg
cgccgggaaagtcgtcgtcagcccctgcgccaaggcaaggacctgagcctgcttgcgccc
gaaaacctgcacagcgaatgtaacgcgctgctcgcccaatggggtcgtcagggtcgggat
tttctgaacatgctggaacagtgggatgatacccgcacccggcaaagtcagtggggcatc
ccgcgcattgatctgttcaccgaagatcagggcgagaccctgctccggcaattgcaggta
ttgatccgcgagcaggaagtcatcgccccggagcactgtacgcccattgccgaaagcgac
cattccatcgtctttcatgtggcccatggcgccttgcgggaactgcagattctccatgac
cagctactggccgcgctggccaaaggatcactgcagccccgggacattatcgtcatggtc
ccggatatcagccgcttcgcccccttggtgcgcgccacttttgatcaatacgagcatgat
gatgcccgctacattccttaccatatcgtcgatttgcaggcccgccaggaatcccccctg
ctggaggccctggactggctgctgcaattgccggaacagcgctgtcggcaaagcgaaatc
cgtgatctgctgcattgcccggccctgcgtcgccgttttgccgtggccacagaagacttg
cccctgctggaatcctggatcgagggcgcaggatggcgctggggattatcggcagcccat
cgcgaggccctgggcatgacccactgcggggtccagaacagtggcgcctttgcactccag
cgcctgaatctcggctatgccaatgggcatgacagtcattttgccggtatcgaagcctat
ggagaggcaggaggactggatgccgcactgttgggtcccctcaaccagttgctggagcat
ctggaattctggcggggccatttatccatcgcccgccatcccgaggactgggccgcagcg
ggccggcaactgctccaggattttttcagtgccgaagacacggatgatgcggaaatcctg
cagcagctggatatggccctgcagcaatggctggatgattgcgctctggccgactttgcc
gaagccttgccgttgtcggtgttccgcggcacttggctggacatgctggacctgcccgaa
ttacagcgccactttctcggcggaggggtcacgttctgtaccctcctgcccatgcgcgcc
gtgccctacccgatgatttgcctgctcgggatgaatgaggaagattatccccgtcgccat
ccgcgtcccgattttgacctgatggccctgccgggcatgagccgccccggcgaccgatcg
cgccgggatgatgatcactacctcatgctggaggcccttctggccgcgcggcagacgctt
tacatcagctggacggggagggatccgcgcaacaacactccccggcaaccggccttgatg
atcagtcagctccgcgatgccattcgccaagcctggccggaggccatacctgcagcgccc
gtgcaatcatccgaggccgacgctgatccggaaaaaaaccgcctgctccggcgcatcacc
cgaatacatcccctgcaggccttcagcccgcgttatctggaagaccccggaaaattcccc
acctgggccagggagtggtttcctgatccggaactgcccaggtttccccaaatcctgcct
gaacccgcaaagagccggcgcagcctgcgggatttgcaggtgttttttcgctgcccgtcg
cgggccttttaccagcagcgtctggaaaccttttttggggaagaggaccccggtgccgag
gatgacgaaacttttgccctgaatggcttggatcgctatgccctgctcaacgccgtcctg
gaaaccgtgaccagcccggaacatagcgaacaccgggccgagaatccagcagcaatcccg
tcgctgacgacgcaaaaaatcgccgcacagttgcgcagcggcgactatcccttcggcatc
ctcgggcaacgccaggccgaggctctgcgcggtactgccgagtccatggtcgcggtctgg
cagacctggatgcagacatggcggcccgatcggcagcgccacaacttgcaccacgccaac
gcttacctgtccctggaagactggctcccccctctctatcgcaatgccgcccatgaccag
gcgtttttggcctgccgcgccagccgcctgctcgatgataaacagcagattcaggcggac
aaggtcgcggaactctggttacagcaattgctggctgccgatcaagggatgcactgcagc
gccctgctcctcggcagggatgccgtgatccgcagctcccagcccattgaaaacgcaagg
gatattctcggggagatagtgcgtgtctgggcggaaggactcctccagcccctgccggtc
accctgaaaacggccgtagccgcgttgcaaggcgcaaaaccccagatcgtctatgaaggt
agcgggtatagcgccggggaggtccacagttatcttggcctcgcccgggactatccggat
tttgccagcttgagcaaccagcgttgcggccctcgccaatggggctttgcagactatgcg
gaagccctttaccggccctttgtcacctggctggaaactctggaaatatctagcctggaa
atggaagcccaagcatga
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