Acidithiobacillus sp. M4-SHS-6: ACJU26_04835
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Entry
ACJU26_04835 CDS
T11526
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
acms Acidithiobacillus sp. M4-SHS-6
Pathway
acms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACJU26_04835 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acms03400
]
ACJU26_04835 (uvrB)
DNA repair and recombination proteins [BR:
acms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJU26_04835 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACJU26_04835 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_25
AAA_22
Kinesin
UB2H
Motif
Other DBs
NCBI-ProteinID:
XNZ26468
LinkDB
All DBs
Position
930327..932354
Genome browser
AA seq
675 aa
AA seq
DB search
MDKRFILECEFAPQGDQPEAIRQLVQGLTDGEFFQTLLGVTGSGKTFTVANVIAATQRPA
IIMAPNKTLAAQLYAEMRAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERPDVIIVATVSAIYGLGDPASYHGMILHLRESDAMDQRAILHRLAEMQ
YTRNPLELKRGTFRVNGDVIDIWPAESEDEAVRVELFGDEIERISLFDPLTGKTIVRLPR
YTIYPKSHYVTPRETILEALESIKAELRERLEDLRKADKLVEAQRLEQRTRFDLEMMAEL
GYCSGIENYSRYLSGRAPGQPPPTLMDYLPANALLFIDESHVTVPQFGGMYKGDRSRKET
LVEYGFRLPSALDNRPLMFSEFEALMPQTVLISATPGPYEMAHSGQIVEQVVRPTGLVDP
EVEVRPAKGQVDDLIDEIQVVVRSGWRVLVTTLTKRMAEDLTDYLHDLEIKCRYLHSDIE
TVERVEIIRDLRAGVFDVLIGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTIGR
AARNLHGRAILYADQVTKSMAAAMRETDRRREKQVQFNQAHHITPKGIVKPVADIIEGVY
RRNAQPAAKVAEKNSSYHLLNDPKTVAIKIKELEENMYRHARNLEFEQAAVLRDEIKKLE
KRLLGTDLEVSLLED
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggataagcgcttcatcctggaatgtgagtttgcgccccagggcgaccagcctgaggcg
attcgccagttggttcaagggctgacagacggggaatttttccagacgctgcttggggtg
acgggctccggcaaaactttcacggttgccaatgtcattgccgcaactcagcgtcctgcc
atcatcatggcgcccaacaagaccctggcggcacagctttacgcggaaatgcgcgccttt
ttcccacacaatgccgtggagtatttcgtcagttattatgactattatcagcctgaagcc
tatgtgccgtcttccgatacttttattgaaaaagacgcgtccattaacgaccacatcgag
cagatgcgtctttccgcaacaaaagcccttctggaaaggccggatgtcattattgtggcg
accgtctctgccatatatggtctgggtgatcccgcttcctaccatggcatgattttgcat
ttgcgtgaatccgacgccatggaccagcgcgccattctccatcgcctcgcagaaatgcag
tacacccgtaaccccctggaattaaagcgcggtacttttcgggtcaatggtgatgtcatt
gatatctggcccgccgaaagtgaagacgaagcagtgcgggtagaactgtttggagatgaa
atcgaacggatttccctttttgacccgctgaccggtaaaaccattgtgcgtttgccgcgt
tacaccatttacccaaaaagccactatgtgacgccccgagagacgattctggaagccctg
gaaagtattaaagcggagctgcgcgagcgcctggaagatttgcgtaaggccgataagttg
gtcgaggctcagcggctggagcagcggacccgctttgacttggagatgatggccgagctg
ggttattgctccgggatcgaaaattattcccgctatctgtcgggacgggcaccggggcag
ccaccgccgacgttgatggattatctgccggccaatgccttgctgttcattgatgaatcc
catgtgaccgtgccccagttcggaggtatgtacaagggcgaccgttcacgcaaggaaacc
ctggtggaatatggttttcgactgccttcagcgctggataaccgacccttgatgttttcc
gagtttgaggctttgatgccccagaccgtgctgatttccgccactccaggcccctatgag
atggcccattccgggcagatcgtcgagcaggtggttcgtcctaccgggttggtggacccg
gaggtggaggtgcgtccggcaaaaggccaggtggatgatctgatcgatgaaattcaggtc
gtggtgcgcagtggttggcgggttctagtgaccaccctgaccaagcgcatggccgaagac
ttgaccgattatttacatgatttggagattaagtgccgctacttgcactcggatattgaa
accgttgaacgggtggaaatcattcgcgatctgcgcgcaggcgtttttgatgtgctcatc
ggtatcaacctcttgcgggaggggctggatatgccggaagtggcgttggtagccattctc
gatgccgacaaggaaggctttttacgttcggagcgttcgctgatccagactatcggccga
gccgcacgcaatttgcatggacgtgccatcttatatgctgatcaggtgaccaaatccatg
gccgccgccatgcgggaaaccgatcgtcgtcgcgaaaagcaggtgcaattcaatcaagcc
caccatattacccccaagggaattgtgaagccggtcgcagatatcatcgagggagtctat
cggcgtaacgcccagccagccgcgaaagtggcagaaaaaaacagcagctatcacctgctc
aatgatccgaaaactgttgccataaaaatcaaggagctggaagaaaacatgtaccgccat
gcgcggaacctggagtttgagcaggcggctgtattgcgggatgaaatcaaaaagctggaa
aagcgcctgttgggtaccgatctggaagtctctttgttagaggactaa
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