Acidithiobacillus sp. M4-SHS-6: ACJU26_08060
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Entry
ACJU26_08060 CDS
T11526
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
acms Acidithiobacillus sp. M4-SHS-6
Pathway
acms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACJU26_08060 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acms03400
]
ACJU26_08060 (xseA)
Enzymes [BR:
acms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACJU26_08060 (xseA)
DNA repair and recombination proteins [BR:
acms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACJU26_08060 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DUF1508
Motif
Other DBs
NCBI-ProteinID:
XNZ24202
LinkDB
All DBs
Position
complement(1593988..1595337)
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AA seq
449 aa
AA seq
DB search
MTFLDEQIPVLSVTALNNTAREIIEGNFPLLRVEGEISNFTAPGSGHWYFSLKDSNAQVR
CAMFRQRNTYSRMQPRNGLRVQVLAQPTLYEGRGEFQLIVEQIQESGEGDLQARFVALKE
KLAAEGLFEARLKRPLPIWPQRVAVITSATGAALQDIRATLARRWPLLAILVYPVLVQGE
QASAQIVEALRKASTRQTEDVIILARGGGSAEDLWCFNEEDVARAIRAAALPVVTGIGHE
IDFTIADFASDWRAATPTAAAEAVSPDRNEWLPRVQDQYRQLARQMRRKLQDDAQRLDFL
RMRLRHPGEGLEAAQRRLALARQHLSRAMNLRETFWAQQFAYLEARRRRQDPVQHLQTWQ
KQLEDSRNKLCQIMLDILRRDHLRQQQSSAALRLLDPLAVLQRGFAVLRDASGKVLFSSA
DTQPGDTLQAILARGSLHCQVMDSNSETD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacatttttggatgaacagattccggtgctttcggtgacagcactgaataacaccgcc
cgggaaatcatcgaaggcaacttcccgttgctgcgggtcgagggggaaatttccaacttt
accgcgcccggctctggtcactggtatttttccctgaaagatagcaacgctcaggtacgc
tgcgccatgtttcgacaacgcaatacctacagccgaatgcagccccgcaatggcttgcgg
gtgcaggtgctggcccaaccgacgctgtatgaaggccgaggcgagtttcaactgattgtg
gagcagattcaggaatcgggtgaaggcgatctgcaagcccgttttgttgccctgaaagaa
aagctggctgccgaaggcctttttgaagcacggctcaaacgtcctctgccgatctggccg
cagcgggttgcggttatcacctcggcgacgggagccgccttgcaggatattcgggccacc
ctggcgaggcgttggccgctgctcgccattctggtatatccggtgctggtgcagggagag
caagccagcgcccagattgtcgaagccctgcgcaaggccagtaccaggcagacggaagat
gtcatcattctggcccgaggcggtggcagcgccgaagatctctggtgtttcaatgaggaa
gacgtagcgcgggccatccgtgccgccgcccttcccgtagtgacagggatcggtcatgaa
attgatttcaccattgccgattttgccagcgattggcgtgccgcgacgcctacggctgcc
gcagaggcggtcagccctgatcgcaacgaatggttacccagagtccaggatcagtatcgc
caattggcaaggcagatgcgcagaaaattacaggatgatgcccagcgtctggatttcttg
cgcatgcgtctgcgtcatcctggagagggactggaagcggcgcagcggcgtcttgcccta
gcccgacaacacctgtcgcgggccatgaatttgcgcgaaaccttctgggcacagcaattt
gcctatctggaagcacgccgccggcgtcaggatcccgtacagcacttgcagacatggcaa
aaacagttggaggatagccgcaacaaactgtgtcagatcatgctggacattttgcggcgc
gatcatctgcgccaacaacaatccagcgctgcactgcgtcttctggaccctttggcggtc
ttgcaaaggggtttcgcggtattacgggatgcctctggcaaggtgctgttcagcagtgcg
gacacccagcctggtgatactctgcaagccatccttgcccggggcagtctgcattgccag
gtcatggattccaattccgaaacagactga
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