Acidithiobacillus sp. M4-SHS-6: ACJU26_09775
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Entry
ACJU26_09775 CDS
T11526
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acms Acidithiobacillus sp. M4-SHS-6
Pathway
acms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACJU26_09775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acms03400
]
ACJU26_09775
Enzymes [BR:
acms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACJU26_09775
DNA repair and recombination proteins [BR:
acms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACJU26_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
AAA_11
UvrD_C_2
Viral_helicase1
AAA_22
HHH_5
AAA
HHH_2
OB_YrrC
HHH
PIF1
TraI_hel_assoc_N
SLFN-g3_helicase
NTPase_1
AAA_5
UvrD-helicase
KTI12
NAT10_TcmA_helicase
AAA_25
nSTAND3
AAA_28
MeaB
DEAD
AAA_16
TsaE
H2TH_5
ATP_bind_1
nSTAND_NTPase5
ABC_tran
RsgA_GTPase
NPHP3_N
Thymidylate_kin
T2SSE
Motif
Other DBs
NCBI-ProteinID:
XNZ24494
LinkDB
All DBs
Position
complement(1860788..1863046)
Genome browser
AA seq
752 aa
AA seq
DB search
MGVVLDMEADTDEFVGEYIRLIYQKPGSNWGIHLVKRDDEPLPVKVTCETLETFREGMLV
VVYGVMVDDPRYGPTFRASSMVTYVPDAESSFEVFSAWLRSGVIRQVGPVIANAILQHFG
ESTRDMLSRPERLKEVSGIGDITAEAIAEDWNRKSSDYRLAGMLHGIGLRGAEIRQVVRY
YKELAATTANMDVEVFGRRILENPYRLTDVPGIGFHRADAIAERLGIAEESPLRMEAALV
YSIHKLCEERGHTLLAEDWILDYANGAQVLNGDYEALLVPLLKDMETSASPSVIPMAPGY
LAPRKYFEAEKSVWSMVLAGQEGVGPVSPELMDRVLGGPLFRYLSEEQKTAIHTLIRGQF
GVLTGGPGTGKTTCIKAVCQALELSGRKVHLLAPSGKAAARIREATGYEASTIHLLLYKM
MSQGKGRFDNKDVIIVDEASMVDSLLLSWLITHLDSGNALFLVGDVNQLPSVGPGRVFGD
ILESGMLPVGRLTQNFRSGGIEGIPHLAGFVRDAHLPSPSEEVVLRQTGADLIWFEPQES
VDEWLFELAERIRGWLEYGDSTLNGQTIQARDIQVLTPTRKGPLGVYALNRVLRNLLVPE
SEDVTLGKDDFGPLSWRKGDRVIQLQNDYEGVEPLFNGDLGEVVEVTRDSVIVSFYKFED
GHTVIYDAGNIDLLQHAFALTIHKSQGSEFRYTLMVLAPGHRFMATNPLVYTGITRCQRQ
LAVLSTKRVFDHAIRREDDVRETCLYRFYAGF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggtattggatatggaagcggataccgatgaatttgtcggggagtacatccgt
ttgatttatcagaagcccggcagtaattggggtatccatctggtaaagcgggatgatgag
ccgttaccggtaaaggtgacatgtgaaacgttagaaacctttcgggaagggatgttggtg
gtggtatatggtgtcatggtggatgacccgcgttatggtccgacgttccgggcatcgtcc
atggtaacctatgtgccggacgcggaatcctctttcgaggtgttttccgcatggttgcgt
tctggggttatccggcaggttggcccagtgattgccaacgccattttgcaacatttcgga
gagagtacgcgggatatgttatcgcggccggaacggttgaaggaggtttccggtattggt
gacattaccgcagaggccattgccgaagattggaatcgcaagtcttcggattatcggctg
gcgggaatgttgcacggtattggtttgcgtggagcggaaatccgtcaggtggttcggtac
tataaggaactggccgccacaacggcgaacatggatgttgaagtctttggtcgtcggatt
ctggaaaatccctatcggttgacggatgtgcctggaatcgggtttcatcgtgcggatgcc
atcgccgaaaggctgggcattgccgaagaatctccgttgcgaatggaagcggcgttggtt
tacagcattcataagctctgtgaggagcgtggacacacgttactggcggaagactggata
ctggattatgcgaacggtgcccaggtgttgaacggggattacgaagcgttgttggttcct
ttgctgaaggatatggaaacatcggcgtcaccttccgttattcccatggcccctgggtat
ctggctccccggaaatatttcgaggcggagaagtccgtctggagcatggttctcgcagga
caggagggtgtggggccggtgtcccctgagctgatggaccgggtgttgggtgggccgctg
ttccggtatttgtcggaagagcagaaaacggccattcataccttgattcgagggcagttc
ggagtattgacgggtggcccgggaacgggaaaaaccacctgtatcaaggcggtttgccaa
gcgctggagttgtccggcaggaaggtgcatctattggcaccatctggaaaggccgcggcc
cgcatcagggaagctacgggatatgaagccagtacgattcatctgttgttgtacaagatg
atgagtcaaggtaagggtcgcttcgacaacaaggatgtcatcattgtggatgaagcatcc
atggtggattccctgttgctgtcctggctcattacccatctcgactccggtaatgccttg
tttctggtaggggatgtgaaccagttgccgtcggtgggtcccgggcgggttttcggagac
attctggagtccgggatgttgcccgtaggccgacttacgcagaacttccgtagcggtggc
atcgaaggcattccccatctggcgggttttgtccgggatgcgcatttaccatctccatcc
gaagaagtcgtattgcgacagacaggcgcggacctgatatggttcgagccgcaggaatcc
gtggacgagtggctgttcgagctggccgaaaggattcggggttggctggagtacggggac
agcacgttgaatggacagaccatccaggctcgggacattcaggttttgaccccgacccgt
aagggacctctcggggtgtatgcgttgaatcgggttctgcggaatctgttggtgccggaa
tcggaggatgtgacactgggaaaggatgactttggtccgttgtcctggcggaagggggac
cgggttattcagttacaaaatgactatgaaggtgtggaaccgctgttcaacggggacctg
ggggaggtggtggaagttacccgtgatagcgttatcgtatccttctacaagttcgaggat
ggacatacggtaatctatgacgccgggaatattgacttgttgcagcatgcgttcgcgctg
accatccacaagtcgcaaggctccgaattcaggtatacccttatggttctggcacccgga
caccgtttcatggccaccaatccgctggtatatacgggaattacccgctgtcagcgtcag
ttggcggtgctttccacaaaacgggttttcgaccatgccattcgtcgtgaggatgacgtt
cgggaaacctgtctataccggttttacgccggattctag
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