KEGG   Acidithiobacillus sp. M4-SHS-6: ACJU26_13305
Entry
ACJU26_13305      CDS       T11526                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
acms  Acidithiobacillus sp. M4-SHS-6
Pathway
acms00300  Lysine biosynthesis
acms00470  D-Amino acid metabolism
acms01100  Metabolic pathways
acms01110  Biosynthesis of secondary metabolites
acms01120  Microbial metabolism in diverse environments
acms01230  Biosynthesis of amino acids
Module
acms_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:acms00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ACJU26_13305 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ACJU26_13305 (dapF)
Enzymes [BR:acms01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     ACJU26_13305 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: XNZ25144
LinkDB
Position
2564240..2565163
AA seq 307 aa
MKATHPPALTALHFTKMQGLGNDFVVFDGIRQQVHLAPEQIRAIADRHFGIGCDQVLLVE
KPDSSDCDFRYRIFNADGGEVAQCGNGARCLAIFVRRSGLCDKAIIQVETRSGRMQLQIL
ENGEVLVDMGVPRFAPGQIPLRAAEEGPEYLLEVDHDTLRMAALSMGNPHAVLRVPDIRH
APVTRLGPRIENHPDFPQRCNVGFMEICDRTHIRLRVWERGAGETLACGSNACAAVVAGI
RWGELDQTVVVDLPGGRLCIQWAGPGQAVMMTGPAQVVFDGTWSLQTDRQAAKGESDHAG
HDIARHC
NT seq 924 nt   +upstreamnt  +downstreamnt
atgaaagccacgcatccacctgctcttactgccctgcatttcaccaaaatgcagggtctt
ggtaatgattttgtcgtttttgatggcatccgccaacaggttcatttagcacccgaacag
attcgcgccattgctgaccgccactttggcattggttgcgatcaagttctgctggtggaa
aaacccgattcatccgactgtgatttccggtaccgcattttcaatgccgacggcggtgaa
gtggcccagtgcgggaacggggcgcgttgcttggcgatatttgtccgtcgttccgggctc
tgcgacaaagccatcattcaggtagaaacccgctccggacggatgcaactccagattctg
gaaaacggggaggtgttggtggacatgggtgtcccgcgttttgcgccagggcagattccc
ttgcgcgccgcggaagaaggcccggaatacctcctggaagtggatcatgacaccctgcgc
atggcggccttgagcatgggcaatccccatgccgtgctgcgtgtgcccgatatacgccat
gcgccggtcacgcgtctggggccacgaattgaaaaccatccggattttccgcagcgctgc
aatgttggcttcatggaaatctgcgatcgcacccacattcgtctgcgggtctgggagcgg
ggtgcgggagaaaccctggcctgcggcagcaatgcctgtgctgcagtggtggcgggcatc
cgctggggagaactggatcagacggtcgtcgtggatcttccgggtggacgcttgtgcatc
caatgggcaggacccggacaagcggttatgatgaccggaccggcccaggtggtttttgac
ggcacctggtccctccagacggaccgccaggcagccaagggagaatccgatcatgcagga
cacgacattgcgcgccattgctga

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