Acidithiobacillus sp. M4-SHS-6: ACJU26_13680
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Entry
ACJU26_13680 CDS
T11526
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acms Acidithiobacillus sp. M4-SHS-6
Pathway
acms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJU26_13680 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acms03019
]
ACJU26_13680 (pnp)
03016 Transfer RNA biogenesis [BR:
acms03016
]
ACJU26_13680 (pnp)
Enzymes [BR:
acms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACJU26_13680 (pnp)
Messenger RNA biogenesis [BR:
acms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACJU26_13680 (pnp)
Transfer RNA biogenesis [BR:
acms03016
]
Prokaryotic type
tRNA degradation factors
ACJU26_13680 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XNZ25213
LinkDB
All DBs
Position
complement(2635871..2637949)
Genome browser
AA seq
692 aa
AA seq
DB search
MAIIRKELDFGGRRLQLETGRMARQANGAVLVSSGDTVVLVTAVGRREVKPGQDFFPLTV
NYQEKAYSAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKDFMNEVQVIATVLSVD
RDQDPDILAMVGASAALAISGIPFQGPVGAARVGYTNGQFMLNPGYSQLAESQLDLVVAG
TRHAVLMVESEAQQLSEDVMLEAVMYGHAGFQPVIETIEALAREVGNPAWDWVAPVADED
LGKAVQAKASGLLQEAYSLVEKQARSQKLEAIRQAMLAEFAGEDAQRADMVRTFLKKMET
GIVRGRILDGAPRIDGRDSKTVRPITIEAGVLPRTHGSALFTRGETQALVVATLGTKGDE
QIIDALQGESRDRFMLHYNFPPFSTGETGMVGSPKRREIGHGRLAKRAIAAVLPEPAEFP
YSIRVVSEVLESNGSSSMATVCGASLALMDAGVPLKAPVAGVAMGLIKDGERFAVLTDIL
GDEDHLGDMDFKVAGTEHGVTALQMDIKIDGITREIMAQALKQALAGRLHILGLMNGVLS
TGRGELSDYAPRIITMHINPDKIRDVIGPGGKVIRALTEETGATIDIQDNGTVTIATVDS
EAGATARRRVELLTAEVQVDTIYDGKVAKIMDFGAFVTILPGRDGLLHISQISCERVSDV
HDYLKEGQAVRVKVLEMDRQGKIKLSMKDIAQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttggccatcattcggaaagagttggatttcggcgggcggcgcctgcagttggaaacgggc
cgcatggcgcgtcaggccaatggagcagtgctggtatccagtggcgatactgtggtactg
gtgacggccgtgggccgccgggaagtcaaaccgggccaggatttctttcccttgacggtc
aattatcaggaaaaagcctattccgcaggtaaaattcccggtggtttcttcaagcgggaa
gggcgtccgacggaaaaggaaacgctgacctcccgtttgatcgatcgtcccattcgtccc
ctgtttccgaaagacttcatgaatgaagtgcaggtgatcgctacggtcctttccgtggat
cgggatcaggatccggatatcctggccatggtcggtgcttccgcagccctggcgatttcc
ggtattccttttcagggaccggtgggcgccgcgcgggtgggatacaccaatgggcaattt
atgctgaatcctggttattcgcaattggccgaatcgcagctggatctggtggtggccggt
acccgtcatgccgtgttgatggtggaatccgaagcccaacaactgtctgaagacgtcatg
ctggaggcggtgatgtatggtcacgctggattccagccggtgattgaaaccattgaagcc
ctggcccgcgaagtgggaaaccccgcctgggactgggtggctcccgttgccgatgaagat
ttgggaaaagccgtacaggccaaggcctcgggtttgttgcaggaagcctattccctggtg
gaaaaacaggcacgtagtcagaaactcgaagccatccggcaggccatgctggccgaattt
gccggagaagatgcccagcgcgccgacatggtgcggacctttctcaagaaaatggaaacc
ggcattgtccggggccggattctcgatggtgcgccacgcatcgatgggcgggacagcaag
acggtgcgccccatcaccattgaggccggggtgttgccccgcacccatggttcggcgctg
tttacccggggggaaacccaggctttggtggtggcgactttgggcaccaagggcgacgag
cagatcattgatgccctgcagggcgaaagccgtgaccgcttcatgctccattataatttc
ccgccattttccacgggcgaaaccgggatggtcggatctcccaagcgccgggaaataggt
catgggcgtctggcaaaacgggccatagcggctgtactgccggaacccgctgaatttccg
tacagcatacgggttgtttctgaagtgctggagtccaacggctcttccagcatggcgacg
gtttgcggtgcctccctggcgctgatggatgccggtgtgcccctgaaggcgccggtggcc
ggggtggccatgggactgatcaaggatggtgagcgctttgcggtgctgaccgatattctc
ggcgatgaagatcatctgggggatatggatttcaaggtggccggaacggaacacggcgtc
accgccctgcagatggacatcaagatcgatggtattacccgcgaaatcatggcacaggcg
ctcaagcaggcgctggccgggcgactgcatatcctcggactcatgaacggtgtgctgtcc
acaggccgtggcgagttgtccgactatgcaccccgcattatcaccatgcacatcaatcca
gacaaaatccgcgatgtgatcgggccgggtggcaaggtcatccgcgccttgaccgaagaa
accggtgcgaccattgatattcaggataatggtacggtaaccattgccacggtggacagt
gaggcgggagctaccgccaggcgacgggttgaactgctgaccgcagaggtgcaggtggat
accatttatgatggtaaggtcgccaagatcatggattttggggcctttgtgaccattctg
cccggtcgcgatggtctcctgcatatttctcagatcagttgcgagcgggtcagcgatgtg
catgactatctcaaggaagggcaagccgtacgggtcaaggtgctggaaatggatcgccag
ggcaaaatcaagctgagcatgaaggatatcgcccaataa
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