Anaplasma centrale: ACIS_01030
Help
Entry
ACIS_01030 CDS
T01133
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acn
Anaplasma centrale
Pathway
acn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACIS_01030 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acn03021
]
ACIS_01030 (rpoC)
03400 DNA repair and recombination proteins [BR:
acn03400
]
ACIS_01030 (rpoC)
Enzymes [BR:
acn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACIS_01030 (rpoC)
Transcription machinery [BR:
acn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACIS_01030 (rpoC)
DNA repair and recombination proteins [BR:
acn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACIS_01030 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ACZ49513
UniProt:
D1ASR0
LinkDB
All DBs
Position
complement(1025906..1030150)
Genome browser
AA seq
1414 aa
AA seq
DB search
MKMLDLYGYTSIAQSFDKICISIASPESIRAMSYGEIKDISTTNYRTFKVEKGGLFCPKI
FGPVNDDECLCGKYRKKRYRGIVCEKCGVEVTSSKVRRERMGHIELVSPVAHVWFLKSLP
SRIGALLDMPMKSIESILYSGDFVVIDPMTTPFSRGEVISESVYNQARDAYGDEGFVALT
GAEAIRELLVRLDLGAIRSGLRSELESTSSEMKRKKVVKRLRIIENFIASGNRPEWMILT
VIPVLPPDLRPLVSLENGRPAVSDLNHHYRTIINRNNRLEKLLRLNPPAIMIRNEKRMLQ
EAVDGLFDSSRRSYVSSRAGSMGYKKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
GLKLHQCGLPKKMALELFKPFICSKLKMYGVAPTVKLANKMIQSEKPEVWDVLDEVIKEH
PILLNRAPTLHRLGLQAFDPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPSNGRPIIVPSKDIVLGIYYLTLQKAHAPDQEVMAFGEFSHVEYALH
EGIVHTSSKIKYKMQRSSDDGTVVSEVVETTPGRLILWQIFPKHKDLTFDLVNQVLTVKE
ITSIVDLVYRSCGQKETVEFSDKLMCLGFQCASQSGISFGCKDMVIPDTKAAHVENASEK
IKEFSIQYQDGLITRSERYNKVVDEWSKCTDLIARDMMKAISLSDAEGKLNSIYMMANSG
ARGSASQMKQLAGMRGLMAKPSGEIIETPIISNFREGLSVFEYFNSTHGARKGLADTALK
TANSGYLTRRLVDVAQDCTVVEYDCKTKGGVVARAVIEGGAVVATLDSVVLGRVAAVDTY
NPVTGELLFSAGELIDEGKVEKIKAAGLDAVRVRSPLTCESKKGICSLCYGRDLAVGDLV
SIGEAVGVIAAQSVGEPGTQLTMRTFHVGGTAMRGVEVSNLIAVLDAKVKLVNSNVVTDK
YGDQIVMSRSCEVVLLDSVGNEKMRHSVPYGAKLYVSDEQPVKMMDKMAEWDPYTIPIIT
EKTGTIKYVDLIYGVSINEVLDESTGISNRVVIDWKLHLQGANLRPRLVLLDEDGNIATL
SNDLEANYFVPIGAVLNVQDGQKVHAGDVITRIPRESIKTRDITGGLPRVIELFEARRPK
EHAIVSDVDGYVEFGKDYYRSKRRIFIRPVDKSLPAVEYLVPKGKHTIVNEGDFVHKGDL
LMDGDPDQHDILRVLGAEALASYMISEIQQVYRLQGVRIDNKHIEVILRQMLQKVEITDP
GDTMYLVGEHAGREEVMRLNRKLEEAGKRTVAYVPILQGITKASLDTNSFISAASFQETT
KVLTEAAFSGKEDSLYGLKENVIVGRLIPAGTGFIMNKVKKLAMLDQSDYATYYNSELRE
IMGDLGNELIAESESSSCRGGEGHLGNGGGVLDY
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctggatttgtacggctataccagtatagcgcagtcgtttgataagatttgc
atatctatcgctagtcctgagagcatcagggcgatgtcttacggcgagattaaggatatc
tccactaccaactatcgcacatttaaggttgaaaaaggcggtcttttctgcccgaaaatc
tttggtcctgtgaacgatgacgagtgtctttgtgggaaatacaggaagaagcggtacaga
ggcatagtgtgcgagaagtgtggggttgaggtcacttcttccaaggtgagacgggaaaga
atggggcatatagagctcgtttcccctgttgcgcacgtgtggttcttgaagtccttgcct
tcccgtataggggcgttgcttgacatgcccatgaagtctattgaaagcatcctctacagc
ggcgactttgtggttattgatcctatgactaccccgttttccaggggggaagtcataagt
gagagcgtttacaaccaagcccgagatgcatacggagatgagggttttgttgccttgact
ggagctgaggccataagagaattgctggtaaggctggatctcggtgcaatcaggtctgga
ttgaggagcgagcttgagtccacctcctctgaaatgaaaagaaaaaaggtggtcaaaaga
ttgcgaattattgagaactttatcgcttcaggcaatagacctgagtggatgatactgacc
gtgattcccgtgttgccgccggatctgagacccttggtttctttggaaaatggcagacct
gcggtttctgatctgaatcaccactacaggacgattataaaccgtaataacaggttggag
aaactgctcaggctcaacccacccgcgattatgatccgcaatgaaaagcgaatgctgcaa
gaggctgtggatgggcttttcgatagcagtaggcgtagctacgtttcaagtagagctgga
agcatgggctacaaaaagtccctgagcgacatgctcaagggtaagcaggggcggttcagg
cagaatttgctaggtaagagggtagactactccgggagatctgtaatcgttgttgggcct
gggctgaaactacaccaatgtggtctgcccaagaagatggctctggagcttttcaagccg
tttatttgctctaagctcaagatgtacggggtggcgccaaccgtgaagcttgcgaacaag
atgattcagagcgagaagccggaggtttgggatgtcttggatgaggtaataaaagagcat
ccgatattgctaaacagagcccccaccctgcacaggctgggtctgcaagcgtttgatccg
gtgctcatagaaggtaaggccatacagctacatccgctcgtgtgtagtgcttttaatgcg
gacttcgacggagaccaaatggcggtgcatgttcctctatccctcgaggcacagcttgaa
gccagggtgttgatgatgtcgacaaacaacattcttagcccctcaaacggtaggccgatc
attgttccatccaaggatattgttctgggaatatattacctgacgctgcaaaaggcgcac
gcgcccgaccaggaggttatggcctttggagagttcagtcacgtggagtatgccctgcat
gaggggatagtgcacacatcttccaagataaaatacaagatgcagcgctctagtgatgac
ggtaccgtcgtgagcgaggttgttgagacgactccgggtaggctgattctgtggcagatt
tttcccaagcacaaggatctgactttcgatcttgtgaaccaggtgcttactgtgaaggag
attacgtctatagttgacttagtgtatagaagttgcgggcagaaggagacggtagaattt
tctgataaactgatgtgtctgggctttcagtgcgcatcgcagtctggtatctcctttggt
tgcaaggacatggttattcctgataccaaagcggcgcacgtggaaaatgcgagcgaaaag
atcaaggagttttccatccaatatcaggatggattaattactcggagtgagcgctacaac
aaggttgtggacgaatggtccaaatgtacggacctaattgccagagacatgatgaaggcg
atatctttatctgacgcagagggaaagttgaattccatctacatgatggcgaactctggt
gccaggggttctgcatctcagatgaagcagctagccggcatgcgtgggctcatggccaag
ccttctggtgagatcatcgaaactccgattatctcaaatttccgtgagggattgagtgtg
tttgagtattttaactccacccatggagcgcgtaaggggcttgctgatactgcgttgaaa
actgcaaactcggggtatcttacccgtaggcttgtggatgtagcgcaagactgtacagtt
gttgagtatgactgcaaaaccaaaggtggggttgttgccagggcggtgatagaaggcggc
gctgttgtggcaacgcttgacagcgtggtgctgggtagggttgctgctgttgacacttat
aaccccgtgaccggggagttgctgtttagtgctggtgagctaatagacgaggggaaggtt
gagaagataaaagcggctggattggatgcggtgagggtgcggtccccgctgacttgtgag
tccaagaaggggatttgctcgctgtgctatggtagggatcttgctgttggggatttggtg
tctataggtgaggctgttggtgtaatagctgcacaatctgtaggtgagcctggtactcag
ctgaccatgcgtacattccacgttggcggcaccgctatgaggggtgtggaggtgtccaac
ctaatagctgtgttggatgccaaggtaaagttggtgaatagcaacgtggtcaccgacaag
tatggagatcaaatagtgatgagtcggtcatgtgaggtggtgctccttgatagcgttggc
aacgagaagatgcggcatagtgtgccttacggtgcaaagctttacgtttcggatgaacag
ccggttaagatgatggacaaaatggccgagtgggatccttacactatacctatcattaca
gaaaagacggggaccataaagtatgttgaccttatctacggtgtgtctataaacgaagtt
ttggatgagtccaccggcatatcgaacagggtcgttatagactggaaattacatctccag
ggggcaaatttgaggccgaggctggtgcttctggatgaggatggcaacattgcaactttg
tctaatgatctggaggcgaactactttgtgcctataggtgctgtgctaaacgttcaggat
ggacagaaggtgcatgcgggagatgtgattaccagaatacccagagagtctattaagact
agagacattactggtgggctacccagggttattgagctgtttgaagcgcgtcgccccaag
gaacacgctattgtgagtgacgttgatggctatgtagaatttggcaaggattattatcgc
tccaagcgccgcatattcatacgacctgtagataaaagccttcctgcagtggaatatttg
gtgcccaagggtaagcacacaatagtgaacgagggtgactttgtgcacaagggtgatctg
cttatggatggggatccagaccagcatgatatactcagagttttaggagcggaagccctg
gccagctatatgatttctgaaatacagcaggtatacagactgcagggtgttaggatagac
aacaagcacattgaggttatcctcaggcagatgttgcagaaagtggaaatcaccgatccg
ggtgatactatgtacctggttggtgaacatgccggccgtgaagaagtgatgcggttaaat
cggaagctggaagaagctggaaagaggaccgttgcatatgtgccgattcttcagggtatt
accaaagcaagtcttgacaccaactctttcatttccgcagcttcgttccaggaaaccact
aaagtcttgaccgaagcggcgttttccggaaaggaagattctctatacggactgaaagag
aatgtaatagttggtaggctaatacccgcgggtacggggttcattatgaacaaagtgaag
aagttggcgatgcttgatcagagtgactatgcaacctactataacagcgaacttcgggag
atcatgggcgatctaggtaatgagttgattgcggagagtgaatcctcttcgtgtcgcggt
ggcgagggccatttggggaatggcggcggagttttagactactga
DBGET
integrated database retrieval system
