Anaplasma centrale: ACIS_01032
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Entry
ACIS_01032 CDS
T01133
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acn
Anaplasma centrale
Pathway
acn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACIS_01032 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acn03021
]
ACIS_01032 (rpoB)
03400 DNA repair and recombination proteins [BR:
acn03400
]
ACIS_01032 (rpoB)
Enzymes [BR:
acn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACIS_01032 (rpoB)
Transcription machinery [BR:
acn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACIS_01032 (rpoB)
DNA repair and recombination proteins [BR:
acn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACIS_01032 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Bac_rhamnosid_C
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
ACZ49514
UniProt:
D1ASR1
LinkDB
All DBs
Position
complement(1030162..1034310)
Genome browser
AA seq
1382 aa
AA seq
DB search
MSSAGGSSGPGYVLNDFDAVPRLSYAKSIDIRDSLTDLIRIQRDSYDAFIGIDRGGSSGI
QSIFQAMFPIRDLLGRAVLEFVGYNIGEPQYDEYECIKRGITFSVPIRITLRFVVWKVQE
VSFKEVKYVVDEGTSERSVKYMKEQEVSIGDLPMMTSYGTFIINGIERVIVSQMHRSPGV
FFDSDKGKTYSSGKLIYSARVIPYRGSWLDFEFDIKDIIYFRIDKKRKLPVSYLLKALGM
SNNDILDSFYDKVLYVRCDKGWRVPFIVDRFKGVRLSYDLMDVDGNVLVKANTRITLRIA
KKLHADGLREYLVPFSGIAGMFVATDLVDPGSGAVIIHAGETITPEHIVKLELFDISEIA
FLNIDFLTVGPYVLNTLFLDKNMTQEDALFEIYRVLRSGESPNLDAVRSFFKGLFFESER
YDLSVVGRIKLNSHLGLDVDENLTVLTKEDIVQVVKKLVLLRDGEGVVDDIDHLGNRRVR
SVGEFIENQFRIGILRLERMIMDYMSSVNFDNAMPCDFVNPKVLATVLKDFFSSSQLSQF
MDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGQNIGLISS
LAIYAKINKYGFIESPYRKVENRVVTDKVEYLLAMQEGDYYIADAGAAIDKNNRFVDDML
YCRHGGNFVMVKSEDVDYVDVSPKQIVSVAASLIPFLENNDANRALMGSNMQRQAVPLLK
SEAPLVGTGMESVVAAGSGAVVLAKRDGIVHRVDGSYIVIRAFDSSKDECLGVDIYRLRK
FQRSNHNTCINQRPVVRLGDYVKANDVIADGSAIDRGELALGKNVLVAFMSWQGYNFEDS
IVISSDVVKRDVFTSIHIEEFECVVRDTPLGPEKIMRSVPDVNEESLSHLDDVGIVNIGA
EVSASSILVGKVTPRPPVSLPPETKLLVTIFGEKVFDCVDSSLYLPPDVEGTVIDVHVFV
RRGVEENDRSLLIKQSEISSFVKERDYEIDVVSEYFHDELKKLLRNAGVKVKGHSDLDSF
FAEASDDALWNTGLADVKVADKVKDMRERFDSIVGEAHRKFEQKVDKLNYGYDLPQGVLT
IVKVFVAVKHNLQPGDKMAGRHGNKGVISRIVPAEDMPHLEDGTPVDIILNSLGVPSRMN
IGQILETHLGWAAVNLGKKIGRILDGGGPSMIADLRDFLDKIYDGQKLKDDVASMSDEAL
LVFANRLRKGVPMAAPVFEGPKDAQISKLLELAEVDPSGQVDLYDGRLGKKFDRKITVGY
IYMLKLHHLVDDKIHARSVGPYGLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQE
MLTVKSDDIVGRVKIYESIIKGDSNFECGIPESFNVMVKELRSLCLNVVLKQDKEFTSGE
VE
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcgggtggttcttctggtcccgggtatgtgctgaatgattttgacgctgtt
cctaggctctcttacgcgaaatccatagacattcgcgactctttgacggatctcataagg
atacagagagattcttatgacgcgttcataggcatagacaggggtggtagcagcggtata
cagagcatctttcaggccatgttccccatacgcgatctcctgggcagagcagtactcgag
tttgtgggttacaacataggtgagccgcagtatgatgagtacgagtgtatcaagcgtggg
attaccttctccgttcccatacggattactctgcgctttgttgtgtggaaagtgcaggag
gtatccttcaaggaagtcaaatatgtagttgatgaaggaacctcggagcgcagcgtcaaa
tacatgaaggagcaggaggtctccattggtgatttgccgatgatgacttcttatgggact
ttcataataaacggcatagagcgggttatagtttcacagatgcaccgttcccctggggtc
ttttttgacagcgacaagggtaaaacttatagttcaggtaaactcatatattccgcgcgc
gttataccttataggggctcttggctcgatttcgaatttgatatcaaagacataatttat
tttcgcatagacaagaagagaaagcttcccgtttcctacctgttgaaagccttgggaatg
tcaaataatgacatccttgattccttttatgacaaggtgctttatgtgaggtgcgacaag
gggtggagggtgccgttcattgttgaccgcttcaaaggcgtgcgtctttcctacgatctc
atggatgttgacggcaacgtgcttgtgaaagccaataccaggattactttgagaattgcg
aagaagctgcacgctgacgggcttagggagtatttggttccgttctctggcattgctggg
atgtttgttgcgactgatctcgtggatcctggtagtggtgccgttatcatacacgctggt
gaaaccataacacctgagcacattgtgaaactggagctgttcgacatcagcgaaattgcg
tttttgaatatcgattttcttacagttggtccgtacgtgttgaacacgctgttcctggac
aaaaatatgacacaggaagatgcgctgttcgaaatttacagggtgctccgctctggagag
tcccccaatcttgatgcggtaaggtcctttttcaagggactgtttttcgaatcggaaagg
tacgacctgtcggttgttggtaggatcaagctaaacagtcacctgggtcttgatgttgac
gagaacctaaccgtgcttaccaaggaagatatagtgcaggtggtgaagaagctggttctg
ctgcgtgatggtgagggtgttgttgacgacatagatcatcttggcaacaggagagttagg
tctgttggagagttcattgaaaatcagttcaggatagggattttgcggttagagcgcatg
attatggactacatgtcatcggtgaattttgacaatgcaatgccctgtgatttcgtcaac
cccaaggtgctagctaccgtacttaaagactttttcagctcctcgcagctgtctcagttt
atggatcagacgaatcctctgtctgaagtcacacacaagcgtaggctgtctgccctgggt
cccggtggtttgacaagggaaagggcgggctttgaggtgcgtgacgtgcatcccacacat
tatggaaggatatgcccgatagaaactccagaaggtcagaatattggcctgataagcagc
cttgcgatatatgccaaaattaacaagtatgggtttatcgagagcccttaccgcaaggtt
gaaaatcgagtggtgacagataaggtggaatacctgttggcaatgcaggagggcgactat
tacatagctgatgctggggcggccatagacaaaaacaaccgttttgtggatgatatgctc
tactgtagacatggcggtaacttcgtgatggtgaaaagcgaggatgttgactatgtcgac
gtttctcccaagcaaatagtgtctgtagcggcctccctcattccgtttttggagaataac
gacgcgaaccgtgctctaatgggttcgaatatgcagcgtcaagctgtgcccctgttgaag
tctgaggcccccttggtcggcactggaatggagtccgtggttgctgctgggtctggtgcg
gtggtgctggcgaagcgagatggtatcgtgcaccgcgtagatgggtcctatatagtgatc
cgggcttttgactccagcaaggacgagtgtctgggcgtagatatctacaggcttaggaag
tttcagcgctccaatcacaacacttgtattaatcagcggcctgtggttaggctcggggac
tatgtaaaggccaatgatgtaattgcggatggttcggcgattgatagaggggaactggca
cttggaaagaatgtacttgtggcctttatgtcctggcagggttacaactttgaagattct
atagtgatttcgagtgacgttgttaagcgggacgtgtttacctccatacacatagaagag
tttgagtgtgttgtaagggatactcctctgggccccgaaaagataatgcgatctgtgcct
gatgtgaatgaagagagtcttagtcacctggacgatgttgggattgtaaatatcggtgct
gaggtctctgcaagtagcatcctagtgggtaaggttacacctaggcctccggtgtctctt
cctcctgagacaaagctgctcgttaccatttttggtgagaaggtcttcgattgcgtcgac
tcctcactttatctgccgcctgacgttgaagggaccgtgatagacgttcatgtgttcgta
aggcgtggggtggaagagaacgataggtcgctgctaatcaagcaaagcgaaataagtagc
tttgtgaaggaaagggactatgaaatcgacgttgtgagcgagtacttccacgatgagctt
aaaaaacttcttcgcaatgcgggggtaaaggtcaaggggcacagcgaccttgatagcttt
tttgctgaggcatctgacgacgccctatggaacaccgggcttgctgatgtgaaagttgcg
gataaagttaaggatatgagagaaagatttgactccattgtcggcgaggcgcatcgcaag
tttgagcagaaagtggataagctgaactacggctacgatttaccgcagggtgtgttgaca
atagtcaaggtgtttgtggcggttaagcacaatttgcagcccggggataagatggccggt
aggcacgggaataagggtgtgatatcgagaatcgttcccgcggaagatatgccgcactta
gaggatggaactccggtggacattatcctgaattctctgggtgtaccttcccgtatgaat
attgggcagattctggaaacccatctaggttgggctgctgtaaatctgggtaagaagata
ggcaggatactcgatggaggtgggccgtccatgattgctgacctgagggattttctggat
aagatttacgatgggcagaagttaaaggacgacgtagcgtcaatgtcagatgaggcactg
ctggtgtttgccaataggctgagaaagggggtgcccatggctgctccggtgtttgagggc
ccgaaggatgcgcagatttccaagttgttggagcttgccgaggttgatccgtctgggcag
gtggatctttacgacgggcgtctgggtaagaagtttgatcgcaagatcaccgttgggtac
atatacatgctgaagttacaccacctggttgatgacaaaatacacgccagatctgtgggc
ccatatggcttggtgacccagcaacctctgggtggtaaatcccactttggagggcagagg
tttggtgagatggaatgttgggcattgcaggcctatggtgcagcatataccttgcaagaa
atgcttacagtgaaatctgatgacattgtgggtcgggtaaaaatttatgagtccataata
aagggtgatagcaactttgagtgtggcattccggagtcattcaacgttatggttaaggaa
ctgcgctccctgtgtctcaatgttgtgctgaagcaagataaagagtttactagtggcgaa
gtggagtag
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integrated database retrieval system
