Anaplasma centrale: ACIS_01148
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Entry
ACIS_01148 CDS
T01133
Symbol
mfd
Name
(GenBank) transcription repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
acn
Anaplasma centrale
Pathway
acn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACIS_01148 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acn03400
]
ACIS_01148 (mfd)
Enzymes [BR:
acn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACIS_01148 (mfd)
DNA repair and recombination proteins [BR:
acn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACIS_01148 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
UvrB_inter
CarD_TRCF_RID
ResIII
UB2H
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACZ49610
UniProt:
D1AT07
LinkDB
All DBs
Position
1146393..1149761
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AA seq
1122 aa
AA seq
DB search
MGSLEVITGVAPEFGDMLMAQMCMEDRHTSFVFVVQEGTSLAHLAKTLKFFDRERDVFIL
PKWDSIPHKGVSPSSLVMATRMKCLLDISNAKAPYVMLTTSGAVAQKVLPAHSVASATIT
VAPGDGLSMDALVQHLVACGYTQSSAVREVGSFAVRGEIVDIFQPIDNKPTRIDFCYDAV
ESIRCFDLDTQITDGGALPSLVIYPASEVIKTEENLNRFYTRYMQQYPNPDPAFAEAMLS
RQKCMGEEQWLPLLQADELSTIFDYAPNAKLVLAEQASEEVLRRLEGAQEEDYTAQSATG
KSALFLDLQGYIQITRSFHKAIFCRFDATSENNLWKHQQVICSSSNIGAVPNFRLLAQEQ
KADVFAVAADYINSAHKTLILACYSEGSLLYFIDKFKAHGIHISRVHEYAGPIGAFNAAV
LPTSCDVVTHDFIVITEYSLLKRQCAAGRSSGTVVSEDTCLAVGDVVVHKDYGVGIFNAL
RTLSVCGHLHDFVEILYRNNDKFFVPVEDIDLITKYGTNTDVVLDKLGSTSWQERSAKLK
KRIKDIAQTLLHSEAMRVLAEGNKFLANQRYLDFCKEFPYVETEDQLKAISEVEEDLASG
KVMDRLICGDVGFGKTEVALRAAFLVINEDPAKQVAVIVPTTLLCRQHLAAFRERFQNYD
INVQQLARSSATQKSKVKKALENGDINIIIGTSALLAEDIRFLDLSLLIIDEEQHFGVQQ
KEQLKKLRNDVHVLSLSATPIPRTLHMSLSGIKNLSVLRTPPMGRMAVDIAIIQYDGNII
KTAILDEVSRGGRVFFTCPFISDIDGVLADLQKLVPNVKVEVAHGRTSTRALDKIMNDFF
DGKFSVLLTTSIIESGIDIPFANTIIVHNADMFGLAQLYQLKGRVGRSTLKGYAYFIVSK
KALPDSPGMKRLEAVRSLNSVGSGFALALQDMDMRGFGNLVGEEQSGNIKEVGIELYHKM
LEEAIAVCQEQPHIQAGCHSVKVGVDANVRIPESYIRELDLRIRVYKKISSLKTAEEADT
CFVELVNRFGAPPPEVMNLLNVMRIKQLCSALGIQEVTQAKRHVTFSLSQGTAAHSGMLK
HIIDNHDLFTICDHSVRMSVPKASQNQILEYILSHLVCMAAA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgggctctcttgaagtaatcaccggcgttgctccagaatttggggacatgctcatggcc
cagatgtgcatggaagatcggcacacatcgttcgtgttcgtcgtacaggaaggcacatcc
ctggcgcatttggcaaaaaccctgaagtttttcgaccgggagcgcgatgtgtttatcctg
cccaagtgggattccattccacacaagggggtctcacccagtagcctggtcatggcaacc
aggatgaagtgcttgcttgacatttctaatgccaaggccccgtacgtaatgttaacaacc
tccggcgcagttgcgcagaaagtgctgccggcacactctgtggccagtgccaccataaca
gttgcacctggcgatggtttgtctatggatgcgctggtacaacatctggtggcatgcgga
tatacgcaatcttccgcggtgcgcgaagtggggagctttgcagtacggggggaaatcgtc
gatattttccaaccaatagataacaagcccaccaggatagacttctgctacgatgctgtt
gagtctatcagatgtttcgaccttgatacgcaaattacggatggaggcgcgttaccaagt
ttggtcatctatccagcatctgaagtaataaaaaccgaagaaaacttaaatcggttctac
acaaggtacatgcagcagtatccaaatcccgatccggcatttgctgaagccatgctttcc
aggcaaaaatgcatgggagaggagcagtggctgccgctgctgcaggcagatgagctgtca
accattttcgattatgccccaaacgcaaaactggtgcttgctgagcaggcttcggaagaa
gtattgcggcgcttggaaggggcgcaggaggaggattatacggcacaatctgccacagga
aaaagcgctttgttcttggatttacaaggctacatacaaattacacggagctttcacaag
gccatcttctgccgctttgatgcaacatcagaaaacaatctctggaagcatcaacaagtc
atatgctcttccagcaatattggcgctgtgccgaatttcaggttgctagcacaagaacaa
aaggctgacgtattcgcggtggccgcggattacattaactccgcacataaaactctaatc
ctcgcctgctactctgaaggatcactgctatatttcatcgacaagtttaaagcacatggc
atacacatatccagagtgcatgagtatgcaggccctataggcgcgttcaacgcggctgtg
ctaccaacaagttgtgacgttgtaacacacgactttattgtgataacagaatacagcctg
ttgaaacgtcaatgcgcggccggtcgctcctctggcacggtagtcagcgaagacacctgc
cttgcagtaggagacgtagtagtacacaaggactacggcgttggcatatttaatgcgcta
cgcacgctcagtgtgtgcggacatttacacgactttgtcgaaatcctctaccgcaataac
gacaaattcttcgtcccggtggaagatatagacttgatcacaaaatacggcaccaatacc
gacgtcgtcctggataaactcggcagcacctcatggcaggagcgcagcgccaaactcaag
aaacgcatcaaagatatcgctcaaacgttgttacactcagaagcaatgcgcgtacttgcg
gaaggcaataagtttcttgcaaatcagaggtacttggacttttgcaaagagtttccatac
gtagaaaccgaagaccagctcaaagcaatatcagaagttgaggaggatctcgccagcggc
aaggtgatggacaggctcatatgtggagacgttgggtttggcaagacggaagtcgcactg
cgcgcggcatttctagtcatcaacgaagatccggccaagcaggttgccgtaatcgtcccc
acaaccctactatgcaggcagcatcttgcggcattcagagagagatttcaaaactacgat
atcaacgttcagcagcttgcacgatcatccgccacgcaaaagtctaaggtaaaaaaggcg
ctcgaaaacggggatatcaacataatcataggtacgagtgcgcttctcgcagaagatata
agattcctagacttgagcttgctcattattgatgaagaacaacacttcggcgtacaacag
aaagaacagctcaaaaagctcaggaatgatgtgcacgttctatccttatccgcaacacca
attccccgaactctgcacatgtcgctttccgggataaaaaacttgagcgttctcaggacc
ccacccatggggaggatggccgtagatattgccatcatacagtacgatggcaacatcata
aaaaccgcaattctagatgaagtcagccgcggtggcagagtgttcttcacctgcccattt
atttctgacattgatggcgtgttggcggacctacaaaaactggtcccaaatgtgaaggtc
gaagtggcgcatggcagaacatctaccagggcgttggataagattatgaatgactttttc
gatgggaagttctccgtcctcctgacaacatccatcatcgaaagtggaatagatatacct
ttcgccaacaccataatagtgcacaatgctgacatgttcggcttggcacagctgtaccag
ctcaagggaagggtgggccggagtacgttgaagggttatgcctacttcatagtgtcaaaa
aaggcgctgcccgattcacctggcatgaagaggctagaagcggtcaggtctctaaatagc
gttgggtcgggctttgccctcgctttacaggatatggacatgcgcggctttggaaatctg
gtgggggaagagcagtctggcaacataaaggaagtgggaattgagctgtatcataaaatg
ctggaggaagccatagcagtgtgccaggagcaaccgcacatacaagcgggctgccacagc
gtaaaagtgggcgtagacgcaaatgttaggattcctgaatcttacatcagggagctagat
ctgcgtataagagtgtacaaaaaaatcagtagcttgaaaaccgcggaggaagcggatacc
tgctttgtcgagctagtaaacagatttggcgcgccaccaccggaggtcatgaatttgctg
aatgtaatgcgcatcaaacagctttgctccgcactcggcatacaagaggtcacgcaagcg
aagcggcacgtcacgttttcactgtcgcagggcacagcagcgcattcaggaatgttgaaa
cacataatagacaaccacgatctctttaccatatgtgaccacagcgtcaggatgtcagta
cccaaggcatcacagaatcaaatactagagtatatattgtcccaccttgtgtgcatggcc
gctgcttaa
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