Acinetobacter sp. NyZ410: MTO68_03725
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Entry
MTO68_03725 CDS
T11536
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acny Acinetobacter sp. NyZ410
Brite
KEGG Orthology (KO) [BR:
acny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acny03016
]
MTO68_03725
Enzymes [BR:
acny01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MTO68_03725
Transfer RNA biogenesis [BR:
acny03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MTO68_03725
Prokaryotic type
tRNA splicing ligases
MTO68_03725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
UOH19299
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All DBs
Position
complement(784037..785242)
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AA seq
401 aa
AA seq
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MSIQMILNAKAEYGVPIKIYTKDVDEESLTQLRKMAQLQFIHSHIAVMPDVHLGKGATVG
SVIPTKNAIIPAAVGVDIGCGMNALRLSLKASQLPDNLSTLRNAIERKVPVGFEMHKQIK
AKASTLSPLDKKLQRITDKHPALKRMLRSFDVTWQKQLGTLGGGNHFIELCIDENDDIWV
MLHSGSRGLGNVIGTYFIERAKKEAQHRFGHVPDKDLSYFAEGSTNFDDYVEAVEWAQEY
AFENRREMMRLILEAIRPLLPSFQMTKEAINCHHNYVQKELHFGEDVFVTRKGAIRAGLD
EYGIIPGSMGAQSFIVKGKGNPDSFCSCSHGAGRKMSRSKAKHLFNQQDLIAQTAGIECR
KDKGVVDEIPSAYKDIHQVMANQNDLIDVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacaaatgattttaaacgccaaagcagaatatggcgttcctataaaaatttat
acaaaagatgtggatgaagaaagcctaacccaattgcgaaaaatggcacaattgcaattt
attcattcacatatcgcagtcatgccagatgtacatttgggtaaaggcgcaaccgtggga
agtgttattcccaccaaaaatgccatcattcctgctgcggttggcgtggatattggttgt
ggtatgaatgcattaagacttagtctaaaagcatctcaattgcccgataatttaagtact
ttacgcaatgctattgaaagaaaagtacctgtcggctttgaaatgcacaaacaaatcaaa
gctaaggcgtcaacactttcacccttagataaaaagctccagcgcattacagacaaacac
cctgctttaaaacgcatgttacgcagttttgatgttacatggcaaaagcaactcgggact
ttaggtggtggtaatcactttattgaactgtgtattgatgaaaatgatgatatctgggtc
atgctgcattcaggtagtcgtggcttaggtaatgtgattggcacttactttatcgaacgt
gccaagaaagaagcgcaacatcgttttggtcacgtgcctgataaagacttgagctacttt
gcagaaggttcgacaaattttgatgattatgtagaagctgtagaatgggcacaagaatat
gcttttgaaaaccgacgtgaaatgatgcgtttaattttagaagcgattcgccctttatta
ccaagttttcaaatgaccaaagaagcgattaattgtcatcataattatgtacagaaagaa
cttcactttggtgaagacgtctttgttacacgtaaaggtgcaattcgtgcagggctcgat
gaatatgggattattcccggttcaatgggcgcgcaatcttttattgttaaaggcaaaggt
aatccagattcgttttgttcatgctcacatggcgcaggacgtaaaatgagtcgctctaaa
gccaaacacttgtttaatcagcaagatttgattgcacaaacagcaggcattgagtgccgt
aaagataaaggtgtggttgatgagattccaagtgcctacaaggatattcatcaagttatg
gccaatcaaaatgatttgattgatgtggtccacacactgaaacaagtattgtgtattaaa
ggctaa
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