Aminobacterium colombiense: Amico_0085
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Entry
Amico_0085 CDS
T01202
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aco03000
]
Amico_0085
Transcription factors [BR:
aco03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Amico_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
HTH_5
MarR_2
MarR
TrmB
HTH_11
Fe_dep_repress
HTH_AsnC-type
Rrf2
TFIIE_alpha
HTH_Crp_2
Dimerisation
Penicillinase_R
HTH_23
FBPase
HTH_27
TnsD
HTH_PafC
HTH_9
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADE56233
UniProt:
D5ECF1
LinkDB
All DBs
Position
76008..76787
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AA seq
259 aa
AA seq
DB search
MAGARKNPGYVQSIERAMSIIEVLDEHGELGISEISDELGLEPSTVHRIVSTLKGLGYVN
QNRENHKYSNSFKLFEIGNNVVKALGLKKQAMPFMRELSDKTNEAVNLAVMDGKYVIYID
KIESQSTIRVDLSVGKRMPTYCTGLGKIMLAYMPETKVRELLEDEPFARFTKNTVPDLET
LFQHLARIRKQGYCIDNEEYIEGLFCVAAPVWGHSGEVLAALSVAVPKFLYADTERLFAI
RDLVIDVAKRFSTTLGYKS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgccagaaaaaatcccggatacgtccaatccatagaaagagccatgtcgatt
atagaagttcttgacgaacacggagagttaggaatttctgaaataagcgatgaacttggt
ttggagccaagcactgtccatcgtatcgtttctaccctcaaaggccttggttatgtgaat
caaaaccgcgaaaatcataaatactccaacagtttcaagctttttgaaataggaaataac
gtggttaaggcccttggtctaaaaaagcaggccatgccttttatgcgagagctttctgat
aaaacaaatgaagccgtaaatttagctgttatggatggcaagtatgttatttacatcgat
aagattgaaagccaatcgaccatacgtgtagatctttctgtaggaaaacgcatgccaaca
tattgcacaggcctcggaaagatcatgctcgcgtatatgcctgaaacaaaggtaagggaa
cttcttgaagatgaaccattcgcgcgttttactaaaaacacggttcccgaccttgaaacc
ttatttcagcatcttgcccgtataaggaagcagggatattgcatcgacaatgaagaatat
attgaggggctgttttgcgtagcggctccagtatggggtcattctggtgaagttttggcc
gctcttagtgtggcggtccccaagtttctttacgcagatacagaacgtcttttcgccatt
cgggatttggtaatagatgtggccaaacgtttttcgaccacccttggatacaaatcctga
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integrated database retrieval system
