Aminobacterium colombiense: Amico_0228
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Entry
Amico_0228 CDS
T01202
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
aco
Aminobacterium colombiense
Pathway
aco00300
Lysine biosynthesis
aco00470
D-Amino acid metabolism
aco01100
Metabolic pathways
aco01110
Biosynthesis of secondary metabolites
aco01120
Microbial metabolism in diverse environments
aco01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Amico_0228
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Amico_0228
Enzymes [BR:
aco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Amico_0228
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADE56374
UniProt:
D5ECU2
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All DBs
Position
236700..237992
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AA seq
430 aa
AA seq
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MGSSKHLFWDGCDTVQLAQNYGTPLYVLSETAVRERCREVKKDFLCKYPNTRAVYASKAF
LTMAMVRIIASEGLGLDVVSGGEIYTAYRAGFPMEKTIFHGNNKTLEELQLALETGVGRI
VADSESELDIIEDAARRRGKRATLLLRVAPGVDAATHQYMATGHTASKFGFPLAGESISR
TIQRIKGSENLVLKGFHFHVGSQLQSNRSHCLAVDALIKEMVLFSSDLGFVTEELNVGGG
YGVPEHEGEERKPLKYFTEGIMERVIAGCEQAGIPVPAIIIEPGRWIVSEAGITLYKVGS
IKEIPGVMTYVSVDGGMTDNPRPALYGAKYWGVVANRADELAGKKVTIVGKCCESGDVLM
KDVMVTDQITRDDILAVFNTGAYNFSMANNYNRLPRPAVVLVREGNAYVIVNRQDYEDLL
SGEVIPDHLR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcgaaacatttattttgggatggctgcgacacagtccagctggcgcaaaac
tacggcacaccgctctatgtgctttctgaaacagcagtacgagaacggtgccgtgaggta
aaaaaagattttctttgcaagtatcccaacacaagagcagtttatgccagcaaggcattc
ctcaccatggcaatggtccgcattatcgccagtgaggggctggggcttgatgtggtctct
ggcggggagatctacaccgcctatagagcgggatttcctatggaaaaaacaatttttcac
ggtaataacaagactctggaagagctgcagctggcattggaaactggcgtggggagaatc
gtagcagatagcgaatccgaattggacattattgaagatgcggccagacgcagaggaaag
agagcaacgcttcttcttcgtgtggcgccaggggttgatgctgcgacccatcaatatatg
gccacagggcatacagcctcgaagtttggatttcctcttgccggtgaatcaataagccgg
acgatacaacgcattaagggctcagaaaatcttgttctgaagggttttcactttcatgtg
ggctctcagctgcaaagcaaccgttcccattgtctagctgtagatgctttgataaaagaa
atggttttgttttccagcgatcttggatttgtcacggaagagttgaatgtgggggggggc
tatggtgttcctgagcatgagggagaagaacgcaagccgttgaaatattttaccgagggt
atcatggaacgagtgatagcgggatgcgaacaagctggtattcctgtccccgcaattatt
attgagccgggcaggtggattgtttccgaggcgggcattactctttacaaggttggaagc
atcaaggaaattccaggagttatgacctatgtaagcgttgacgggggaatgacagataat
ccaaggcctgccctttacggagcgaaatattggggagttgtcgcaaatagagcagatgag
cttgcggggaagaaagtgacaatagtggggaaatgctgtgagtctggagacgtgttgatg
aaagatgtcatggttacagatcaaataacccgtgatgatatccttgccgttttcaacacg
ggcgcctacaacttctcaatggcaaacaattataaccgtttgcctagaccagcggttgtc
cttgttagagagggcaacgcctatgtgatagtgaaccgtcaagactatgaagaccttctt
tcaggggaagtgattccagatcacttgcgataa
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