Aminobacterium colombiense: Amico_0252
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Entry
Amico_0252 CDS
T01202
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aco03032
]
Amico_0252
03400 DNA repair and recombination proteins [BR:
aco03400
]
Amico_0252
Enzymes [BR:
aco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Amico_0252
DNA replication proteins [BR:
aco03032
]
Prokaryotic type
DNA Topoisomerases
Amico_0252
DNA repair and recombination proteins [BR:
aco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Amico_0252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
ADE56397
UniProt:
D5ECW5
LinkDB
All DBs
Position
267936..270389
Genome browser
AA seq
817 aa
AA seq
DB search
MEEKKGEPLFGKVVPLPLVEEIKHSYLDYAMSVIVGRALPDARDGLKPVQRRILYAMMEL
GLRHNTAYKKSARVVGETMGKYHPHGDSAIYDTMVRMAQDFSMRYPLVDGQGNFGSIDGD
PAAAMRYTEARLYEIGELMLADIDQDTVDWGPNFDESLQEPLCLPAMLPNLLINGSSGIA
VGMATNIPPHNLVEVVDALCYLIDTEPEQVDIGEILFRMPGPDFPTGGLILGRDGIIDAY
RTGRGKITMRGRTHIEEGKRGKTFIVITEIPYMVNKTNLIETIAKNVQDKTIDGVMDLRD
ESDREGLRIVIEVNRDTDPNLVLRQLYRRTQLQSTFGVINLALIDGYPKELSIEEMLNIF
LNHRRSVVRRRTQFRLEKAEARAHIVEGLVKALDIIDEVIALIRGSATTEEAKEGLISKL
DFSEAQAQAILEMRLQRLTGLEREKLEAELAQLLSDIERYQTILGNPKVLDSVIKEELLE
VKRRFGNERKTEIIDAVEDVSIEDLIPESDIVVVLSRDGYLRRKDLQEYTLQGRGGKGRK
GTALQEEDEVALVAVTSTHRDIYLFTSKGRVLALKGYVIPESKTGRGKLINRFVALEEGE
RVVTMHGRAVDGAKYAFFITLRGTAKRLDLSELENLTRAGRRVMGLDEGDEISQIVLTSG
DDHLLIVTAQGQALRTHESEFRPMGRTARGVRGIRLRKNDYVIGCDVVANGRWPLLLSEN
GFGKRTKYDEFSLRHRGGSGVIVMNLSDRTGLIVGCWSVAEGDEIVAITSRGRMIRLAVS
ESPVLGRTAMGSIMMRLDEGDTVATASVVSTEDGEDD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaaaaaggcgagcccctttttggcaaagtagttcctctccctttggtggag
gagataaaacatagttatctagactatgctatgagcgttatagtggggcgagctctccca
gatgcccgtgacgggctaaaaccagtacaaagaaggatactctatgccatgatggagctt
ggccttcgtcataatacggcatataaaaagtcggcccgtgtggttggtgaaaccatgggt
aaataccaccctcacggagactcggctatttatgacactatggttcgtatggctcaggac
tttagtatgcgctaccctctcgtcgatggccaggggaacttcggttctattgacggagac
ccggcagccgcaatgcgttacactgaggctcggctttatgagatcggcgagctcatgctg
gctgacatagatcaggacactgtagattgggggccaaactttgatgagtcccttcaggag
cccctttgtctgccggcgatgttgcccaaccttcttatcaacggtagttccggtattgct
gttggaatggctacaaatattcctcctcataaccttgtggaggttgtggatgccctttgc
taccttatcgatacagagccggagcaggttgatataggtgaaattctgtttcgtatgcct
ggtcctgattttccaacgggaggtcttattcttggccgggatggcataatagatgcctat
cgcacagggcgtggcaagatcactatgcggggaagaacccacatagaagagggaaaaaga
ggaaagacgttcatcgttatcaccgaaatcccttacatggtgaacaagaccaatcttata
gaaaccatagctaagaatgtccaggacaaaactattgacggggttatggatttacgagac
gaatctgatcgagaaggccttcggattgttatagaggtgaaccgtgatacagaccccaat
ttggttttgagacagctttatcgccggactcagctccagagtacttttggtgtcattaat
ctagcgctgattgacgggtatcccaaagaactttctattgaggaaatgctcaatattttc
ctcaatcacagacgaagcgtggtcagaagaagaacccagttccgtctggaaaaagctgag
gccagggctcatatagtggaaggtcttgtaaaagcccttgacatcattgatgaagttatt
gccctgattagaggatctgcaacaactgaagaggccaaagaagggcttatttcgaaattg
gacttttccgaagcgcaggctcaagccattctagaaatgcgcttgcagcgtctaacaggc
cttgaaagagaaaaacttgaagctgaactggctcaacttctttctgacatcgagcgttac
cagacaattctcggaaatcctaaagtccttgattccgttatcaaagaagaattgcttgaa
gtaaaaagacgttttggaaatgaaaggaaaactgaaatcattgatgccgttgaggatgtt
tctattgaagacctcattccagaaagcgacattgtggttgtattatccagagatggttat
ttaaggcgaaaggatcttcaggaatatacgctgcagggaaggggaggcaaaggaagaaaa
ggcacagcccttcaggaagaagacgaggttgcactggtagcggtgacaagcacccatagg
gatatctatctcttcacatcgaaggggcgggttcttgcccttaaaggctatgtgatcccc
gaatcgaagactggacgaggcaaactcataaaccgctttgtggccctagaagaaggggag
cgggttgtgaccatgcatgggcgggcggtagacggagctaaatatgctttctttattacc
ctgaggggaaccgcgaaacgacttgatctgtctgagcttgaaaatttaacccgtgcagga
cgcagagtcatgggccttgacgaaggagacgaaatttcccagatagtgctgacttcaggg
gacgaccatttgcttatagtaacggcccagggacaggccctacgtacccatgaatcggaa
ttccgccccatggggcgaacagcgagaggtgtaagggggattcgccttcggaaaaatgat
tatgttatagggtgcgatgtggtggcaaatggtcgctggcctctgttgctgagcgaaaat
ggatttgggaaacggacgaaatacgatgagttttctcttcgccatcgtggcggtagtgga
gttattgtcatgaacctcagcgataggacaggtttgatcgtaggttgctggagcgttgcg
gaaggggatgaaatcgtagcgataacaagtcgcggacgtatgattcgtctggctgtatcg
gaatccccggtcttaggaagaacggcaatgggcagcataatgatgaggcttgacgagggg
gacaccgttgctactgcaagcgttgtaagcactgaagatggagaagacgattaa
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integrated database retrieval system
