Aminobacterium colombiense: Amico_0355
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Entry
Amico_0355 CDS
T01202
Name
(GenBank) transcriptional regulator, CdaR
KO
K02647
carbohydrate diacid regulator
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aco03000
]
Amico_0355
Transcription factors [BR:
aco03000
]
Prokaryotic type
Helix-turn-helix
Other families
Amico_0355
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_1
HTH_20
HTH_8
SpoVT_C
Motif
Other DBs
NCBI-ProteinID:
ADE56498
UniProt:
D5ED66
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Position
complement(374490..375692)
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AA seq
400 aa
AA seq
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MLEKIAQKIASSTAELINIDLIITDEKGIIIGASDPSRKGSLHEPSLEAIQTGKISIQRE
NEVTHLTGVKPGVTLPIEFTGKRIGTIALTGSPARVTQFGLLVKKHTELILSEKLFSEVF
FIRSRAIQTLMEQIASFNPERDDESSLYVSARGLGFELQIPRIAVAAELLYSRPADKVTD
VGTAPYTQMDVLMAIRTAFNRPQDISTMMDSDRYEILRAANSLLNEKEVVERTRKECEVL
QGLLQEKGLHIVIGIGSLAQNLSRLPASHRDAWKAVTIGKNIYQKPGIYSIGDMMLEDLL
TTASRDVAERYRNSHLAPLRKASDSQELIHTFRVWCEHRFSPSAAAQALNIHKNTLNYRI
NKIESICGLDSQNFKEIFSLYTAIIIHELSDRGDSQLFLR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaaaattgcacaaaaaatcgcttcttctaccgccgagcttataaatatagac
ttgattattactgatgaaaaaggaatcattatcggggctagcgatcctagcaggaagggg
tctcttcatgaaccttcccttgaagcaatccaaacaggaaagatttccatccagagagag
aacgaagttacacatttaacgggcgtgaaacctggggtaactttacctatcgaatttact
gggaaaagaattggaaccatagccctcacaggttccccagcaagagttacccaatttggc
ctgcttgtaaaaaagcatacagagctgatattaagcgaaaagttgttctctgaagttttc
tttattcgaagccgggctatccaaacccttatggagcaaatcgcctcttttaaccccgag
cgcgatgatgaatcatcattgtatgtttcagcacgcggacttgggtttgagcttcaaatt
ccaagaattgccgtagcagcggaattactctattcccgaccggcagacaaggttacagac
gtgggaactgccccctatacccagatggacgtgctcatggccataagaacagcctttaac
cgacctcaagacatttcaaccatgatggattctgaccgctatgagatattaagggccgct
aactctttgctcaatgaaaaggaagtcgtggaaagaactcgaaaagaatgtgaagtgcta
caaggccttctccaggagaaagggctacatattgtcattggcattggatctcttgctcaa
aacctgtcaaggctcccagcttcccatcgcgacgcctggaaagccgttactatagggaaa
aatatttatcaaaaaccggggatctattctatcggagacatgatgcttgaagatctcctg
actacagcgagccgcgatgttgccgaacgttacagaaattcccatttagctcctttgagg
aaagcttccgacagtcaggagctcattcatacctttcgggtctggtgcgagcaccgtttt
agcccaagcgctgctgctcaagctctcaacatccataaaaacacgctcaactacaggatc
aataaaattgagtctatctgcgggcttgattctcagaatttcaaagagatattttctctt
tatacagcaatcattatccacgaactttctgataggggtgacagtcagctctttttgcga
taa
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