Aminobacterium colombiense: Amico_0366
Help
Entry
Amico_0366 CDS
T01202
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Amico_0366
Enzymes [BR:
aco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Amico_0366
Peptidoglycan biosynthesis and degradation proteins [BR:
aco01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Amico_0366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_2
ANAPC3
TPR_6
SLT_2
Fis1_TPR_C
SLT_4
TPR_1
SRP_TPR_like
Motif
Other DBs
NCBI-ProteinID:
ADE56509
UniProt:
D5ED77
LinkDB
All DBs
Position
386356..388323
Genome browser
AA seq
655 aa
AA seq
DB search
MLIRKLHVLAIVLLFLSVSAGMAVGSPDTSQPPSVEEAFWKREWKTIDEFLKLDHAALSP
RELTLGANALWLQKRWGEALALLQKIDEADFPSALVPYRDMMIVLALERTGEKQKAYERA
QGLLNKVPEELGFYVAYALSRLSDDNETRRCWLETMLTKATNQAQTIQTLNELLRTAGDN
LAYALQLLKFEPMNSQALSCLGKSPRPYGGPVANALGYAAYLRGEYAKAIPLFLEVPLDS
ADGLKSRYYRAVSLYRLERYEEALKLWEWLALNGKSYGESSVRRLGILAGQGEREKTLES
LQRIADRGNSTVRPRALYSLYTLVPEEQKEFLKKELIDKYAMTEGTQAILWDDAWQAWKK
GNTREALRIWEHFFSLSNGAMRERLLYWTARGYEKLEQKGKAEELFHTLISDYPLSIYSF
LASPGGPSFTGETPSELEREKCELEEWGFVFYARLRLLKEGSSSAYYRAAILSEWLEDEP
GAYSAASTLASALLKKNPLPKKGICFLYPRPYRGHVLQSAERFGVEPNLIWSVMKQESAF
DADVNSWVGAIGLMQLMPATGKEEAKLLGMEKVDLWQPETNILLAASHLGRLQKRFRRLE
WAIAAYNAGGGAVGRWIKEGEERPFDEWMEDIPYNETRNYVRKVMGNLFVYRMLY
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtgttgataagaaaacttcatgttctggcaatagtattgctttttctatcagtaagtgca
ggaatggcagttggttccccagatacatctcagcccccttctgtggaagaggctttctgg
aagagagaatggaagaccatagacgaatttctcaaacttgatcatgcggccctttctcca
agagaactgaccttaggggcgaatgctctatggctgcagaagcgatggggggaggccctt
gctcttcttcagaaaatagatgaagcggatttcccctccgcattagttccctatcgggat
atgatgattgttctcgcccttgagaggactggtgaaaaacagaaagcatatgagagagct
caggggcttcttaacaaggttccggaagaactgggtttctatgtagcctatgcactttcc
cgcctttctgatgataatgaaactcgaaggtgttggcttgaaacaatgctaacaaaagct
acaaaccaggcacagacgattcagacccttaacgagctgttacggacggcaggtgataat
ttggcctatgccctgcagctattaaaatttgaacctatgaatagccaggctttgtcctgc
cttggaaagagtccgagaccttatggcggacctgtcgcaaacgcccttgggtatgcggcc
tatttacggggagaatatgccaaagccatccccctttttttagaggttcctctcgattca
gccgatggcctcaagtcccgttactatagggcagtttccctctaccgcctcgagcggtat
gaagaggcattgaaattgtgggaatggctggctctgaatggtaaaagctatggggaatct
tctgttcggcgtctgggaattctggctggccagggggaaagggagaaaacccttgaatca
ttgcagcgcatagctgatagaggaaattctacagtgcggccaagggctctttactctctt
tacacccttgtacctgaagaacagaaggagtttcttaaaaaagaactcattgataagtat
gcaatgacggaagggacccaggccattctttgggacgatgcttggcaggcctggaaaaaa
ggcaacacacgggaagcccttcgcatatgggagcacttcttttcactgagcaacggcgcc
atgagagaacggcttttatattggactgccagagggtatgagaagcttgagcaaaaaggc
aaggcagaggaactttttcatacgcttatttcggattatcctctctcaatatacagtttc
ctcgcttcaccaggggggccatcctttactggagaaactccgtcagagctcgagagagaa
aagtgcgagcttgaagaatgggggttcgttttttacgcgagattgagacttctgaaagaa
ggaagtagttccgcctattatcgggctgctattctctcagaatggcttgaagatgagcct
ggagcctacagtgcggcatcgacattggcctctgcccttttaaagaaaaatcccttgcct
aaaaaaggcatctgttttttatatcctcgcccttatcgcggccacgttctccagtcagca
gaacgatttggtgtggagccgaatttgatctggtcagtgatgaaacaggaaagcgctttt
gatgcagatgtaaacagctgggttggggccattggccttatgcagcttatgcccgctaca
ggtaaagaagaggcgaaactcctggggatggaaaaagtggatctttggcagcctgaaact
aatattttgcttgctgcttcccatctggggcgattgcaaaaacgtttccgtcgacttgaa
tgggctattgcagcctataacgctggaggcggggctgtaggacgatggataaaagagggg
gaagagcgcccctttgatgaatggatggaagatattccctataatgagacgagaaactat
gtacgtaaagtgatgggaaatctttttgtttacagaatgctctactaa
DBGET
integrated database retrieval system
