Aminobacterium colombiense: Amico_0582
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Entry
Amico_0582 CDS
T01202
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aco
Aminobacterium colombiense
Pathway
aco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Amico_0582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aco03019
]
Amico_0582
03110 Chaperones and folding catalysts [BR:
aco03110
]
Amico_0582
03029 Mitochondrial biogenesis [BR:
aco03029
]
Amico_0582
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aco04147
]
Amico_0582
Enzymes [BR:
aco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Amico_0582
Messenger RNA biogenesis [BR:
aco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Amico_0582
Chaperones and folding catalysts [BR:
aco03110
]
Heat shock proteins
HSP60 / Chaperonin
Amico_0582
Mitochondrial biogenesis [BR:
aco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Amico_0582
Exosome [BR:
aco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Amico_0582
Exosomal proteins of other body fluids (saliva and urine)
Amico_0582
Exosomal proteins of breast cancer cells
Amico_0582
Exosomal proteins of colorectal cancer cells
Amico_0582
Exosomal proteins of bladder cancer cells
Amico_0582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
VitK2_biosynth
Motif
Other DBs
NCBI-ProteinID:
ADE56717
UniProt:
D5EDT5
LinkDB
All DBs
Position
608285..609922
Genome browser
AA seq
545 aa
AA seq
DB search
MPKILTFSEEARHAMLRGIDKVADTVGVTLGPKGRNVVLEKKFGSPTITNDGVTIAKEID
LEDSFENTGAQLVKEVASKTNDVAGDGTTTATVLARAIIREGMKNVAAGANGMLMRQGIE
KAIDFVVDELKKMAIPVKNRDKIAQVAAISANDSGIGQLIAEAMEKVGQDGVITVEDSQT
VGTTLEMVEGLQFDKGYISPYMVTDPERMEVALDDAYILIHDGKISNIKDLLPVLEKVVQ
TGKPLLIIAEDVEGEALATLVVNKLRGVMQVAAVKAPGFGERRKAMLSDIAIVTGGQVVS
EDVGIKLDSADISMLGKAKKIRVTKEETTIVEGSGNPDEIRKRAAQIKRELEDSTSDYDR
EKLQERLAKLVGGVAVIQVGSATETEQKELKHRIEDALNATRAAVEEGIVAGGGVAIINC
IASLEKFLENFNGDVKTGGTIVLSSLSSPLHLIAQNAGFQGDVIVEKVRGLRAGNGLDAS
TGEYVDMIEAGIIDPVKVTRSALQNAGSIAAMVLTTEAIVADKPEPKGASPMPGGPGMGG
MEGMY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatcctaacttttagtgaagaagcccgccacgccatgctgcgtggtattgat
aaagttgctgatacagtgggggttacccttgggcccaaaggacggaacgttgtccttgag
aagaagtttggctcacccacgattacaaatgatggtgttaccatcgcaaaagagatcgat
cttgaagattcttttgaaaatacaggcgctcagcttgttaaagaagtagcttctaaaaca
aacgatgttgctggagacggaactactaccgctacagttcttgccagggccatcattcgc
gaaggcatgaagaacgttgctgctggtgccaatgggatgcttatgagacagggcatagag
aaagccatcgactttgtggtggatgaattgaaaaaaatggctattcccgttaagaaccgt
gataagattgcccaggtcgccgcaatttccgctaacgattccggcataggccagcttata
gcagaagccatggaaaaagtcggacaggatggcgttatcactgttgaagacagccagact
gttggaacaactcttgaaatggtcgagggacttcagttcgataaaggctatatcagccct
tacatggtgacagatcctgagagaatggaagtcgctcttgatgatgcatatatccttatt
cacgatggaaagatcagcaatataaaagaccttctcccagtgcttgaaaaagtagtgcag
actggtaaacctcttctgattattgctgaggatgtggagggagaagctctcgccaccctt
gtagttaacaaactgaggggcgttatgcaggtcgctgcagtgaaggcccctggttttggt
gaacgccgcaaagccatgcttagcgatatcgccattgtaactggtggtcaggttgtgagt
gaagatgtaggcattaagcttgatagcgctgacatttccatgcttggtaaagcaaagaaa
atccgtgttaccaaagaagagacgaccatcgttgagggttctggtaatccagacgagatc
cgcaaacgggcagcccagatcaaacgcgaacttgaagactctacgtccgattacgataga
gaaaaactacaggaacgccttgccaagctcgttggcggcgtggccgttatacaggtgggg
tccgctaccgaaactgagcagaaagaactgaagcaccgcatagaagatgcacttaatgct
acaagggctgcagtagaggagggtattgtagcgggtggcggcgtagccataatcaactgc
attgcctccctcgagaaattcctcgagaactttaatggtgatgtaaaaacaggtggaact
attgttctgagttccctttcgtctcccctgcaccttatcgcccaaaacgcaggattccag
ggcgatgtcattgttgagaaagtccgcggcttaagagctgggaatggtcttgatgcgtct
actggcgaatatgtagatatgattgaagccggaataatagaccccgttaaagttacgcgg
agcgctttgcagaatgctggctccatagcagccatggttctgactactgaagctattgtt
gccgataagccggaacccaagggtgcaagtcccatgcctggcggccccggaatgggcggc
atggaaggcatgtactag
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