Aminobacterium colombiense: Amico_0611
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Entry
Amico_0611 CDS
T01202
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
aco
Aminobacterium colombiense
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aco03019
]
Amico_0611
03009 Ribosome biogenesis [BR:
aco03009
]
Amico_0611
Messenger RNA biogenesis [BR:
aco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Amico_0611
Ribosome biogenesis [BR:
aco03009
]
Prokaryotic type
rRNA processing factors
Amico_0611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF7368
Motif
Other DBs
NCBI-ProteinID:
ADE56746
UniProt:
D5EDW4
LinkDB
All DBs
Position
639994..641493
Genome browser
AA seq
499 aa
AA seq
DB search
MTDRKIIANTLDPEEMRVAILEKGKLVDIFVERMWERQKTGEIYKARVDSVLPGIHAAFV
NLGDGRNAFLYLNDAKGINLKPNVEVVVQVVKAARKNKGARVTSRISLPGRYLVLVPDGQ
ETGVSKRIIDEEERKRLRFLAKKLRDEGEGYGVIIRTAAEGVDEETLTHDLHTLVDLWRE
IRHDAQIQAAPCLIYRDIGLVGRVLRDELTGDVSEIVIDSEEECHKVKDYLNRILEGQEP
EVSLYEGSSPIFDFYGIERELETALDRKVWLRSGAYLIIDHTEALTVIDVNTGKYVGDTD
LRHTVLDTNLEAADEIARQLRLRAIGGIVVIDFIDMEYEEDRQKLLQRLDEVFQKDRYRA
RIFGVSQLGLVEITRKRARPDVRSVMTRGCPFCGGYGWVLKEDSVAMHIKRFLRKVSLSN
KADAMLLETHSVIAQYIADTYLAVWEEELQRRIFIAAAPEFAWNKYRLDMQGPIDVVERR
IEQMEQWEAQIRVYRTASS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgtaaaatcatagccaacactttagatcctgaagagatgcgagttgcaata
ttggaaaaaggaaaacttgtagatatctttgttgagcgaatgtgggagcgtcaaaagaca
ggagaaatctataaagccagggtggatagtgttttgcctggcatccacgccgcttttgta
aatttgggggacggcaggaatgcctttttatatttaaatgatgcgaagggtataaacctg
aagccgaacgtggaagtggtagtgcaggttgtgaaggcagccagaaaaaataaaggcgcc
agagtaacttcgagaatttctttgccggggcgctacctagttcttgtccctgatggacag
gaaacaggtgtttctaaaagaataatagacgaggaagaacgtaagcgactccgtttcctg
gctaaaaaactgcgtgatgaaggggagggttacggtgtgatcattcgcaccgctgctgaa
ggggttgacgaagaaacccttacccatgatcttcacactcttgtagacctatggagagag
atacgccatgatgcccagatacaggcagctccatgcctcatttatagggatattgggctt
gtaggaagggttctcagggacgagctcactggcgatgtaagtgaaatagttatagacagc
gaagaagagtgtcataaagtcaaggattatcttaatcgcatacttgaggggcaggaacct
gaagtgagcttatatgaaggaagctcgcccatctttgatttttatggcatagagagggag
cttgaaactgcccttgatcgcaaggtatggctgcgttcaggagcctatcttattattgat
catacagaggcccttactgttattgatgtgaatacaggtaagtatgtgggagatacggat
ctgcgccatactgtccttgacactaatctcgaggcagcggatgaaatagcacgtcaacta
aggctgagggctattggcggaattgtcgtcattgactttatcgacatggagtatgaagaa
gacagacaaaaacttcttcaacgcctggatgaagtgtttcaaaaagatcggtatcgtgca
aggatatttggcgtttcccaattaggtctagttgagattacaagaaaaagggcgagacct
gatgtacgttcggtcatgacccgtggatgtccattttgcgggggctatggatgggttttg
aaggaagatagcgtggccatgcatattaagcgttttttgagaaaagtttctctttctaac
aaagcagatgccatgctccttgaaacccactctgttattgctcaatatatagcggacact
taccttgccgtttgggaagaagagttgcaaagacgaatctttatagcggcagcgcctgaa
tttgcgtggaataagtaccgtctcgatatgcaggggcccatcgacgtagtagaacgtcgt
attgagcaaatggagcaatgggaggcacagattcgtgtttatcgaacggcttcgtcttaa
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