Aminobacterium colombiense: Amico_0656
Help
Entry
Amico_0656 CDS
T01202
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aco
Aminobacterium colombiense
Pathway
aco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Amico_0656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aco03021
]
Amico_0656
03400 DNA repair and recombination proteins [BR:
aco03400
]
Amico_0656
Enzymes [BR:
aco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Amico_0656
Transcription machinery [BR:
aco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Amico_0656
DNA repair and recombination proteins [BR:
aco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Amico_0656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
AMIN-like
DUF6025
Motif
Other DBs
NCBI-ProteinID:
ADE56791
UniProt:
D5EE09
LinkDB
All DBs
Position
679057..680076
Genome browser
AA seq
339 aa
AA seq
DB search
MLDKVELMRPEIRIEECSSTFGKVIVEPLERGYGVTLGNALRRVLLSSVKGAAITSVRVD
GVLHEFSTIPGVREDVIELMLNLKHIPVHSYSKDVKVLHLEAEGPKQVVAADIQPDSEIE
FIDPDAPVCVLEDGAQLSMDLYIEQGVGYATIDRPRPAYLPADALLIDAIYSPVLKVHYD
VEAARVGQRTDYERLVLDVTTNGVIAPDVAVGEAAKIIRSYFGFIVEDVDKLHPLEGIDE
EEAALSADEAAAEAAEAAKEEDDLLSRPVRELELSIRSENCLLRGGIHTIGDLLTRTRDD
LLKIRNLGKISLREIEERLEKQGLRLSTEKSEEKAVKED
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgttggacaaagtggaactaatgcggcctgagatccgaattgaggagtgtagctcgacc
tttgggaaagttattgtagagccccttgaaagaggatatggtgtaacgctgggtaacgct
ctccgtcgcgtgttgctttcctctgtgaagggggcagccattacttcagtccgtgttgat
ggcgttctacatgagttcagtactattcccggtgtgcgtgaggacgtaatcgaactgatg
ctgaatcttaaacacatcccagtgcattcatacagcaaggatgttaaagtgttgcacttg
gaagcggaaggacccaaacaggttgttgcggcagatattcagcccgatagcgaaattgag
tttattgatcctgacgcgccagtatgcgtactggaagatggagcacaattatcgatggac
ctttatatagaacagggagttgggtatgccactattgatcgaccgcgacctgcttacctt
cccgcggatgcccttttgatcgatgcgatttactctccagtgctgaaagtgcattacgac
gtagaagctgccagagtaggacagcgtactgactatgaacgactcgttttagatgtaact
acaaatggcgttattgcgccggatgttgctgtaggagaagcggcgaagattatccgctca
tacttcgggtttatcgtagaggatgtcgataagttacaccctcttgaggggattgatgaa
gaagaggcagctctttcagcggatgaggctgcggcagaggctgcagaagctgccaaagaa
gaagatgaccttctttctcggcctgtgagggagcttgagctttccatacggagtgagaac
tgtcttcttcgcggaggtatacacactatcggtgatcttctaacgcgtacacgggacgac
ctgcttaaaatccgtaacctcggaaagatatctctccgtgagatagaggaaagacttgag
aagcagggacttcgcctcagcacagagaaaagcgaagagaaagcagtaaaggaggactag
DBGET
integrated database retrieval system
