Aminobacterium colombiense: Amico_0732
Help
Entry
Amico_0732 CDS
T01202
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aco
Aminobacterium colombiense
Pathway
aco03030
DNA replication
aco03430
Mismatch repair
aco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amico_0732
03430 Mismatch repair
Amico_0732
03440 Homologous recombination
Amico_0732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aco03032
]
Amico_0732
03400 DNA repair and recombination proteins [BR:
aco03400
]
Amico_0732
Enzymes [BR:
aco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amico_0732
DNA replication proteins [BR:
aco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amico_0732
DNA repair and recombination proteins [BR:
aco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amico_0732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADE56865
UniProt:
D5EE83
LinkDB
All DBs
Position
748603..752037
Genome browser
AA seq
1144 aa
AA seq
DB search
MTTRPFVHLHVHSEYSLLDGAIRCGELAERVASWGMPAVALTDHGAMYGAIEFYDRCLAA
GIKPIVGCEVYVDPEGHTSREKKGRNFHLLLLAENQQGYNNLIKLVSIANTDGFYYRPRI
DYDLLTQYSQGIIASSACLAGEIPSLILQGKENDALAKAHMYRDIMGEDNFFLEIMYNAI
PEQAVVNRSLVQMARKNNFNLVATNDAHYLNKEDYDWHEILLCVQTGATINDPDRMSFST
NDFYLRSPEEMDSLFGAELPDALDNTLAIAERCSLKFDLGTRDYKLPSFDLPEGETLESN
LEKEAMAGLKQRLHKDNVPEEYKKRLDYELKVIKKMGFAGYFLIVASIIRAAKDRDIPIG
PGRGSAAGSLVAYSLRITELDPLKYNLLFERFLNPERVSMPDIDTDVSDKGREELLQYIA
EKYGVDRVAQIITFDRMKSKAAIRDVGRALGMPYSDVDVVAKLIPDGARSIPEALDQSED
LRNLTHKDLAVSRLLDSASKIEGLARHCSQHAAGVVITPMPITDLVPVRRIGENQIVTQF
PMEPLEKLGLVKMDFLGLKTLSVLEEAINNIKLNGKTPPDLNKIPLNDNLTYEMLQRGNT
LGVFQLESTGMRQLLRKIKPDCFEDLIAVLALYRPGPLGSGMVDQYIERKHGRAVVEYLH
PELSEVLKETYGVILYQEQVMQSAACLAGYSLGEADLLRRAMGKKKVEVMQQQRKMFADG
CAQHNVPARKAEEIFDIIQEFAGYGFNKSHSAAYALISYQTAYLKANFQPEFMAAYLTSQ
IGSKKDVMARYIREVRNSGIEVLPPDVNSSMESFAAVDEVVRFGLGAVAKAGHGAVEAII
AARECGGEFSSLWNFLCRVDLRVVNKSVIENLIKAGAFDGLNSNRRQLISALPDFVALAQ
RKGEEKNQCSLLSLLDEDSESGDLEPELPDIEDYAIYERLDMEKEVVGLYISGHPFTQHE
TLVSRYSTCSISNLKYWRSRNLFPQIGGMILSVHEKYTKRGDPMGILEVEDAESKLEVIC
FPKIWSSIKDQIEPGEICIIRGTLDERGSGNIIAKEIVSFQAIQGKMPPFVKIVLDGTLL
QPNSMKNFIRSLKDFPGRSQVLLEIRNGVGSVVILLSGIKVDGPTIKSKGLAPALPEEAY
EVFC
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcgtcctttcgtacacttacatgttcatagtgagtatagccttctcgatgga
gccattcgctgtggagaattggctgagagggttgcttcctggggcatgccagcagtggct
cttaccgatcatggggcaatgtatggcgctatagagttttatgatagatgccttgcagca
ggcattaaacctattgtaggttgtgaagtctatgttgatccagaaggacacacatctaga
gaaaaaaaggggagaaattttcaccttctccttttggctgagaaccagcaaggatataac
aatttaattaagctcgtttctattgccaatacagatggtttttattatagaccacgaata
gattacgatcttcttactcagtatagtcaggggatcattgcttcgtctgcttgtcttgcg
ggagaaattccatcgctgatccttcagggtaaagagaatgatgccttggcaaaggcgcat
atgtatcgggacattatgggggaagacaatttttttctagagattatgtacaatgccata
cctgaacaggctgtggtcaataggtccctcgtccaaatggcaagaaaaaacaattttaat
cttgttgccaccaatgatgctcattacttgaataaagaagactacgactggcatgaaata
cttctatgcgttcagactggggcgaccataaacgaccccgatcgaatgtctttttcaaca
aatgatttttatcttcggtctcctgaagagatggacagtctctttggagctgaattaccg
gatgctcttgataacaccctcgctatagcagagcgttgttctctgaaatttgacctcggt
acgagagattataaactcccaagctttgaccttccagaaggtgaaactcttgagtcgaat
cttgaaaaagaagcaatggcaggtcttaaacagcgtcttcataaggataatgtgccagag
gaatataaaaaacgccttgattacgagctgaaggttattaaaaaaatggggtttgcggga
tactttcttatcgtggccagcattataagagcagcgaaggatcgagatattccaattggt
ccgggaagaggttctgccgctggatctcttgttgcatatagcttaaggattactgaactg
gaccctctgaaatacaatcttctttttgaacgtttccttaatccagagcgtgtcagtatg
cctgatatagatacggatgtttctgataaggggagggaagagcttcttcaatacattgct
gaaaaatatggtgtagatagagttgcacagataataacctttgatcgaatgaaaagcaaa
gcagctattagagatgtgggaagagcattggggatgccctacagtgatgtggatgttgtt
gctaagcttattccagatggagcaaggtcaatcccggaggctctggatcaaagcgaggac
cttcgcaacctcacccataaagacttggcggtaagtcggcttcttgacagcgcttctaag
atagagggccttgcccgccactgttctcagcatgcagcaggcgtggttattacccctatg
ccaattacagatctggtgccagtgcgaaggattggggaaaaccagattgtgacacagttt
cccatggagcctctggagaagctgggacttgtaaagatggatttcttgggtctgaagacg
ctgtctgttttggaagaggctataaacaatatcaagttaaatggcaaaacgccgccagac
cttaataaaattccccttaatgacaatttgacctatgaaatgttacaaaggggaaacaca
ctcggtgttttccagcttgaatccacaggaatgcgacaattgcttcgtaagataaaaccg
gattgttttgaggatctcattgccgtccttgctctgtatcggccaggtcctttgggcagt
gggatggttgatcagtatattgagcgcaaacatggacgggctgtagttgagtatctccac
cctgagctgtcagaagtattgaaagaaacctatggggttatcctttatcaggaacaagta
atgcaaagtgcggcctgtctagctggatattccctaggagaggccgatctattgcgtcga
gccatggggaaaaagaaagtggaagtaatgcagcagcagcgaaagatgttcgctgatggt
tgtgcccaacataacgttccggctcgaaaagcagaagaaatctttgatatcatccaggaa
tttgcagggtatggttttaacaagtcccatagtgcagcttacgctttgatcagttatcag
acagcctatttgaaagcaaactttcagccagaattcatggctgcctatctaacaagtcaa
ataggttcaaaaaaagatgtaatggctcgctatattcgcgaagtaagaaattctggcata
gaggttttgcccccagatgtcaactcttccatggagtcttttgccgcagtagacgaagta
gttcggttcggattgggagccgttgcgaaggcaggtcacggggcagtagaagctattatt
gcggcacgggaatgtggcggtgaattttcttcgctatggaactttttatgtcgtgttgat
ttgagggttgtaaacaaatctgtaatagaaaatcttattaaagcaggagcctttgatggc
cttaactcgaatagacgccagcttatttcagctcttcctgattttgtggctttagctcag
aggaagggcgaggagaaaaaccaatgttccctcctaagtcttttagatgaagattctgag
agtggggatcttgaaccggaacttcctgatatagaagattatgctatttatgaacgtctc
gacatggaaaaagaagtggtggggctatatattagcggccatccctttactcagcatgaa
acgctggtcagtagatatagtacatgcagcatctccaatcttaaatactggaggagcaga
aatctttttcctcagataggcggaatgattctttccgtccatgaaaaatatacaaaacgg
ggagatcccatgggaatccttgaggtggaagatgcagagtcaaaactggaggttatatgc
tttcctaagatttggtcttctataaaagaccagatagagccaggggagatctgcattatt
cgtgggactcttgatgaaagagggtcagggaacatcatagcaaaggagattgtttctttc
caggccatacagggaaaaatgccaccttttgttaagatagttctcgatggaacgttattg
caaccgaattcaatgaaaaattttatacgctctttgaaggactttcctggacgttctcag
gtgttgttagagattcgaaatggagtaggaagcgtagtaatccttctttcagggataaag
gtagatgggcctacgattaaatctaagggtttagctccagcgcttcctgaagaagcttat
gaggttttttgttga
DBGET
integrated database retrieval system
