Aminobacterium colombiense: Amico_0735
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Entry
Amico_0735 CDS
T01202
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
aco
Aminobacterium colombiense
Pathway
aco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amico_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aco03400
]
Amico_0735
Enzymes [BR:
aco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Amico_0735
DNA repair and recombination proteins [BR:
aco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Amico_0735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADE56868
UniProt:
D5EE86
LinkDB
All DBs
Position
754437..755279
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AA seq
280 aa
AA seq
DB search
MPLIGAHISIAGGLEKAIERGEELECEAIQMFSKNQIQWHCAPISMARAERFLYAWRNSS
IRKVVVHASYLINLASPDDMRKKSIVALIEEIERCDMLGIDDLVVHPGSSRGRPREEGVE
KLIDSLQQVLDKTSNMRVRILLETMAGQGSVLGSSLVEMKSILHNFPKNERVGVCLDTCH
LFASGYELRSLEAYERFVASVLDKIGLERIGCWHLNDSVYGRNSHLDKHQHIGEGDLGLL
PFSFIVNDQRWNAVPALLETPQGGCGNKGNLAILRKLRGG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgattggcgcccatatttctattgccggcggtctggagaaagctatagagcga
ggagaagagcttgaatgtgaagctatacagatgtttagcaaaaatcagattcaatggcat
tgtgcccctatttctatggctcgcgcggagaggtttctttacgcatggcgtaatagttct
attcgtaaagttgtggtccatgcttcctatcttataaatctggcttctcctgatgatatg
cgaaaaaaaagcatagtagcccttattgaggaaattgagcgctgtgatatgcttggaatt
gatgaccttgtagttcatccaggttcttctcgtggccgtcccagagaagaaggggtggaa
aagctaatagatagtttgcagcaggttttggataaaacttcaaatatgagagtgcgtatc
ctacttgaaactatggcgggacaaggcagtgtccttgggagttctcttgtcgaaatgaaa
tccatactccataacttcccaaagaatgaaagggtcggagtatgtcttgatacgtgccat
ctctttgcttctggatatgaattacggtctcttgaggcatatgagcgctttgtagcatct
gttctggataagatagggcttgaaagaatcggctgttggcatttaaatgatagcgtctat
ggccgcaacagccatcttgataaacaccagcacataggagaaggagatttaggattgttg
cctttttcttttatagtgaatgaccagcggtggaatgcagttccggcacttttagaaact
ccacagggtggttgcgggaataaaggcaatttagctatacttcgcaagctaagaggagga
taa
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