Aminobacterium colombiense: Amico_0996
Help
Entry
Amico_0996 CDS
T01202
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
aco
Aminobacterium colombiense
Pathway
aco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Amico_0996
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aco01007
]
Amico_0996
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aco03016
]
Amico_0996
Enzymes [BR:
aco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Amico_0996
Amino acid related enzymes [BR:
aco01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Amico_0996
Transfer RNA biogenesis [BR:
aco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Amico_0996
Prokaryotic type
Amico_0996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
SUKH_5
ATG16
Motif
Other DBs
NCBI-ProteinID:
ADE57121
UniProt:
D5EEY9
LinkDB
All DBs
Position
complement(1033695..1034966)
Genome browser
AA seq
423 aa
AA seq
DB search
MLEIKWIRNNIEEVKAFLVNRNNDFDVDRIVILDEEKRSLLTETENLKAQRNEGSRKVAE
AKASGQDADVLMEEMKNLGQMVKEKDSKIAEIDQELQSLLLQMPNRPHDSVPVGKDENDN
MEVRKWGTPKEFVFEPQAHWDIGEKLGILDFEKGVSLAESRFTVLKGAGARLERALINFM
LDLHTEHHGYKEIQPPFMVSSQTMQGTGQLPKFAEDLYKCEGEDLWLIPTAEVPLTNLHS
GEILPEEVLPLYYTAYTPCFRKEAGSYGRDVRGMMRQHQFDKVELVKISKPENSYDELEK
LTANAEEVLQKLGLPYRVITLCTGDMGFGASKTYDLEVWLPFQDKYREISSCSNCEDFQA
RRMGTRYKPADGGRPRYVHTLNGSGIAVGRTLIAVLENYQREDGSVEIPEALVPYMGGMK
EIR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaatcaaatggatacgtaacaacattgaagaagtgaaagcatttctggtaaac
agaaataacgatttcgatgtggacaggatagtgattcttgatgaggaaaagagatccctg
ctcactgaaactgaaaatctaaaagcccagagaaacgaaggttcccgtaaagttgcagag
gcgaaggcttccggtcaggatgccgatgtccttatggaagaaatgaaaaatcttgggcag
atggtaaaggaaaaagacagcaagattgcggaaatagaccaggagctgcagtccttgctg
ctccagatgcctaatcgccctcatgactccgttcctgtgggtaaagatgaaaatgacaac
atggaagttcgaaaatggggcaccccaaaagaatttgtctttgagcctcaggctcactgg
gacatcggggaaaagcttggaattcttgactttgaaaagggtgtttctcttgcggaaagc
cgttttactgtccttaaaggtgctggcgcccgtcttgaaagagccctgattaattttatg
ctcgaccttcacacagaacaccatggatataaagagatacagcccccctttatggtttca
tcacagactatgcagggcactggccagcttcccaaatttgcggaagacttatacaaatgt
gagggagaagacctctggcttatcccgactgcagaagttcctttaaccaatcttcatagt
ggggaaattctccctgaagaagttttgcctctatattacacagcctacacaccttgcttt
agaaaagaagcaggaagctacggcagggatgtaagaggaatgatgcgtcagcatcagttc
gacaaagtagaacttgtcaaaataagcaaaccggagaatagttatgatgagcttgaaaaa
cttacagctaatgcagaggaagttctgcagaaactggggctcccctacagggttattacg
ctttgcacaggagatatgggctttggcgcaagcaaaacctatgaccttgaagtttggctt
cccttccaggataaataccgtgaaatcagctcttgcagtaattgtgaggatttccaggcg
aggagaatgggaacccgctataagcctgccgatggaggaaggccgcgttatgtacacacc
cttaacggatctggtattgctgtaggcagaaccttgatcgcagttctcgagaactaccag
agagaagatggttctgtggaaattccggaggcactcgttccctatatgggcggaatgaaa
gaaatacggtga
DBGET
integrated database retrieval system
