Aminobacterium colombiense: Amico_1023
Help
Entry
Amico_1023 CDS
T01202
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
aco
Aminobacterium colombiense
Pathway
aco03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aco00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Amico_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aco03011
]
Amico_1023
Ribosome [BR:
aco03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Amico_1023
Bacteria
Amico_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
CvfB_2nd
PCB_OB
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
ADE57147
UniProt:
D5EF15
LinkDB
All DBs
Position
complement(1056316..1057827)
Genome browser
AA seq
503 aa
AA seq
DB search
MMEEMNNDVKTTENFENMDMESMLEKYAGEEIHKGKVVTGTIVGANEDGWLVDVGYKCEG
FLPRREWTHKILVEEEEEPSINDEIQVQVINIRHGEDAQLLVSRWRCEFDRRWAELESFV
SSHDLISVRGIRKVKGGLMVNCFNLEGFIPISHLAEEGRGVNPGKFVGEVFDVKLLEKDR
RKRRLVLSRRMLVEEAVEEQRNKFYTTVSEGDILEGRVSSITSFGAFINLGPIDGLVHIS
ELSWKRNVKPKEVVKKGETVKVKVIGIEQENNRVSLSIKQTQPDPWSIVEENWKIGDKAS
GVVTNVTDFGAFVEVGPGIEGLIHIGDLSWARIKHPRDVLKKGQNVEVVVLDVDAEKKRM
SLGYKQLNDPWTGIEERYTKGQDITVKVVRLADFGAFVEVEEGVEGLIHISQLSTKRVDK
PEDVLSEGEEVLARVIEINPAERRMRLSISALFEEEIRKNREEEKKKRLAQKAEESRQKQ
QPTFHEEEPSITIGDVLKDFLNR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaaatgaataatgatgttaaaacaaccgaaaatttcgaaaatatggatatg
gaatccatgctcgagaaatatgcgggagaggaaattcacaaagggaaagttgtaacaggg
acaattgttggagcaaatgaagatggttggctcgtggatgtaggatataagtgtgaaggt
tttcttcctcgaagagagtggactcataaaatattagttgaagaggaagaagagccctca
attaatgatgaaattcaagtgcaggtcatcaatatacgccacggagaagatgctcagctt
ctggtaagccgctggcgctgtgaatttgacaggcgttgggctgagttggaatcctttgtt
tcttctcacgatcttatttcagtgagagggatacgcaaggttaagggcggattgatggtc
aactgctttaatctcgaagggtttattcctatttcccatcttgctgaagagggacgaggg
gtgaaccccggtaaatttgtgggagaagtctttgatgtaaaacttttggagaaagaccga
cgcaagagacgtcttgtcctttcaagaagaatgcttgttgaagaagcagtagaggagcag
cggaataaattttatacaacagtttcagagggagacattcttgagggcagggtaagcagc
attacatctttcggcgcttttatcaatcttggccccatcgatggtcttgttcacattagc
gagctttcatggaagcgcaatgtaaaaccgaaagaagttgttaaaaaaggtgaaaccgta
aaggtaaaggttattggtatagagcaggaaaacaaccgtgtttccctcagcataaaacaa
acccagccagatccctggagcattgtagaagaaaactggaaaattggggacaaagcttct
ggtgtagttacaaatgtcacagactttggggcttttgtagaagtggggcctggcattgaa
gggcttatccatattggtgaccttagctgggcgcgtattaaacatccacgtgatgtcctt
aaaaagggccagaatgtagaagttgtggttcttgatgtggatgcggagaaaaaacgtatg
agcctcggctacaaacagcttaatgacccttggacaggaatagaggaaagatataccaaa
ggacaggatattactgttaaagttgtcaggctggctgatttcggtgcctttgtagaagtg
gaagaaggcgttgaggggctcatccatatctctcaactgagcacaaaacgtgtagacaag
cccgaagacgtattgtctgaaggcgaggaagttttagcgcgggtcattgaaattaatcct
gcagagcgaagaatgagactaagtattagcgctctcttcgaagaagagattcgtaagaat
cgagaagaagagaaaaagaaacgtctcgctcagaaagcagaagagagcaggcaaaaacag
cagccaacattccatgaagaagagccctcgattactatcggggatgtcttgaaagacttt
cttaatcgctaa
DBGET
integrated database retrieval system